EnzdesBaseProtocol.cc File Reference

#include <protocols/enzdes/EnzdesBaseProtocol.hh>
#include <protocols/enzdes/AddorRemoveCsts.hh>
#include <protocols/enzdes/EnzdesTaskOperations.hh>
#include <protocols/toolbox/match_enzdes_util/EnzdesCacheableObserver.hh>
#include <protocols/toolbox/match_enzdes_util/EnzConstraintIO.hh>
#include <protocols/toolbox/match_enzdes_util/EnzdesSeqRecoveryCache.hh>
#include <protocols/toolbox/match_enzdes_util/EnzdesCstCache.hh>
#include <protocols/toolbox/match_enzdes_util/util_functions.hh>
#include <protocols/toolbox/task_operations/LimitAromaChi2Operation.hh>
#include <protocols/enzdes/enzdes_util.hh>
#include <protocols/enzdes/ModifyStoredLigandRBConfsMovers.hh>
#include <protocols/ligand_docking/ligand_functions.hh>
#include <boost/foreach.hpp>
#include <core/chemical/ChemicalManager.hh>
#include <core/chemical/ResidueTypeSet.hh>
#include <core/chemical/ResidueProperties.hh>
#include <core/chemical/util.hh>
#include <core/conformation/Residue.hh>
#include <core/kinematics/MoveMap.hh>
#include <core/kinematics/FoldTree.hh>
#include <core/pack/task/TaskFactory.hh>
#include <core/pack/task/PackerTask.hh>
#include <core/pack/task/operation/TaskOperations.hh>
#include <core/pose/Pose.hh>
#include <core/pose/PDBInfo.hh>
#include <basic/options/option.hh>
#include <core/scoring/dssp/Dssp.hh>
#include <core/scoring/Energies.hh>
#include <core/scoring/ScoreFunction.hh>
#include <core/scoring/ScoreFunctionFactory.hh>
#include <core/scoring/constraints/BoundConstraint.hh>
#include <core/scoring/constraints/ConstraintSet.hh>
#include <core/scoring/methods/EnergyMethodOptions.hh>
#include <core/pack/rotamer_set/UnboundRotamersOperation.hh>
#include <basic/Tracer.hh>
#include <protocols/simple_moves/PackRotamersMover.hh>
#include <protocols/toolbox/pose_manipulation/pose_manipulation.hh>
#include <protocols/simple_moves/MinMover.hh>
#include <utility/io/izstream.hh>
#include <basic/options/keys/score.OptionKeys.gen.hh>
#include <basic/options/keys/packing.OptionKeys.gen.hh>
#include <basic/options/keys/enzdes.OptionKeys.gen.hh>
#include <basic/options/keys/docking.OptionKeys.gen.hh>
#include <basic/options/keys/in.OptionKeys.gen.hh>
#include <core/id/SequenceMapping.hh>
#include <core/import_pose/import_pose.hh>
#include <core/pose/util.hh>
#include <utility/vector0.hh>
#include <utility/vector1.hh>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::enzdes

Macros
#define	foreach_   BOOST_FOREACH

Functions
static thread_local basic::Tracer	protocols::enzdes::tr ("protocols.enzdes.EnzdesBaseProtocol")

Detailed Description

Author

Florian Richter, flori.nosp@m.c@u..nosp@m.washi.nosp@m.ngto.nosp@m.n.edu

Macro Definition Documentation

#define foreach_   BOOST_FOREACH

Referenced by protocols::enzdes::EnzdesBaseProtocol::create_enzdes_movemap().