EvaluatedArchive.cc File Reference

#include <protocols/jd2/archive/EvaluatedArchive.hh>
#include <protocols/jd2/archive/ArchiveManager.hh>
#include <protocols/jd2/archive/VarianceStatisticsArchive.hh>
#include <core/io/silent/SilentFileData.hh>
#include <core/scoring/ScoreFunction.hh>
#include <core/scoring/Energies.hh>
#include <core/pose/Pose.hh>
#include <basic/datacache/BasicDataCache.hh>
#include <protocols/evaluation/EvaluatorFactory.hh>
#include <protocols/evaluation/PoseEvaluator.hh>
#include <utility/exit.hh>
#include <utility/excn/Exceptions.hh>
#include <numeric/util.hh>
#include <basic/Tracer.hh>
#include <basic/prof.hh>
#include <basic/options/option.hh>
#include <basic/options/option_macros.hh>
#include <basic/options/keys/constraints.OptionKeys.gen.hh>
#include <basic/options/keys/in.OptionKeys.gen.hh>
#include <utility/vector1.hh>

Classes
class	protocols::jd2::archive::SortPredicate

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::jd2
	protocols::jd2::archive

Macros
#define	OBSOLETE(key)

Functions
static thread_local basic::Tracer	tr ("protocols.jd2.Archive")
std::string const	SPECIAL_INITIAL_DECOY_PENALTY ("special_initial_decoy_penalty")

Macro Definition Documentation

#define OBSOLETE

(

key

)

Value:

if ( basic::options::option[ key ].user() ) {                         \
		tr.Warning << "WARNING: Option "<< #key<< " is deprecated!" << std::endl; \
  }

Referenced by protocols::jd2::archive::EvaluatedArchive::EvaluatedArchive().

Function Documentation

std::string const SPECIAL_INITIAL_DECOY_PENALTY

(

"special_initial_decoy_penalty"

)

Referenced by protocols::jd2::archive::EvaluatedArchive::select_score(), and protocols::jd2::archive::EvaluatedArchive::setup_default_evaluators().

static thread_local basic::Tracer tr ( "protocols.jd2.Archive"  )

static