KinematicMover.cc File Reference

#include <protocols/loops/loop_closure/kinematic_closure/KinematicMover.hh>
#include <protocols/loops/loop_closure/kinematic_closure/KinematicPerturber.hh>
#include <core/id/DOF_ID.hh>
#include <core/id/TorsionID.hh>
#include <core/chemical/AtomType.hh>
#include <core/conformation/Conformation.hh>
#include <core/conformation/Residue.hh>
#include <core/conformation/ppo_torsion_bin.hh>
#include <core/conformation/ResidueFactory.hh>
#include <core/conformation/util.hh>
#include <core/pose/Pose.hh>
#include <core/scoring/Ramachandran.hh>
#include <core/scoring/ScoreFunction.hh>
#include <core/scoring/ScoringManager.hh>
#include <basic/Tracer.hh>
#include <numeric/random/random.hh>
#include <numeric/random/random_permutation.hh>
#include <numeric/xyzVector.hh>
#include <numeric/kinematic_closure/bridgeObjects.hh>
#include <numeric/kinematic_closure/kinematic_closure_helpers.hh>
#include <stdio.h>
#include <basic/options/option.hh>
#include <basic/options/keys/loops.OptionKeys.gen.hh>
#include <utility/vector1.hh>
#include <numeric/conversions.hh>
#include <boost/foreach.hpp>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::loops
	protocols::loops::loop_closure
	protocols::loops::loop_closure::kinematic_closure

Functions
static thread_local basic::Tracer	TR ("protocols.loops.loop_closure.kinematic_closure.KinematicMover")
	Performs a kinematic closure move on a peptide segment. More...

Function Documentation

static thread_local basic::Tracer TR ( "protocols.loops.loop_closure.kinematic_closure.KinematicMover"  )

static

Performs a kinematic closure move on a peptide segment.

Author

Daniel J. Mandell

Amelie Stein (ameli.nosp@m.e.st.nosp@m.ein@u.nosp@m.csf..nosp@m.edu), Oct 2012 – next-generation KIC

Vikram K. Mulligan (vmull.nosp@m.ig@u.nosp@m..wash.nosp@m.ingt.nosp@m.on.ed.nosp@m.u), August 2013 – generalization for beta-3-amino acids and other nonstandard backbones