Template.cc File Reference

#include <protocols/abinitio/Template.hh>
#include <core/types.hh>
#include <core/conformation/Residue.hh>
#include <core/pose/Pose.hh>
#include <core/kinematics/MoveMap.hh>
#include <core/id/AtomID.hh>
#include <basic/options/option.hh>
#include <basic/options/keys/templates.OptionKeys.gen.hh>
#include <core/fragment/FragSet.hh>
#include <core/scoring/constraints/AtomPairConstraint.hh>
#include <core/scoring/constraints/NamedAtomPairConstraint.hh>
#include <core/scoring/constraints/ConstraintIO.hh>
#include <core/scoring/constraints/ConstraintSet.hh>
#include <core/scoring/func/HarmonicFunc.hh>
#include <core/sequence/util.hh>
#include <core/sequence/DerivedSequenceMapping.hh>
#include <ObjexxFCL/format.hh>
#include <utility/vector1.hh>
#include <basic/Tracer.hh>
#include <cstdlib>
#include <string>
#include <vector>
#include <core/fragment/FragData.hh>
#include <core/fragment/Frame.hh>
#include <core/fragment/FrameList.hh>
#include <core/scoring/dssp/PairingsList.hh>
#include <core/scoring/dssp/StrandPairing.hh>
#include <fstream>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::abinitio

Functions
static thread_local basic::Tracer	tr ("protocols.abinitio.Templates")
void	protocols::abinitio::dump_movemap (kinematics::MoveMap const &mm, Size nres, std::ostream &out)

Function Documentation

static thread_local basic::Tracer tr ( "protocols.abinitio.Templates"  )

static

Author

Oliver Lange

Christopher Miles (cmile.nosp@m.s@uw.nosp@m..edu)

Referenced by protocols::abinitio::Template::_read_constraints(), protocols::abinitio::Template::cull_violators(), protocols::abinitio::Template::map2target(), protocols::abinitio::Template::map2template(), protocols::abinitio::Template::map_pairings2target(), protocols::abinitio::Template::pick_large_frags(), protocols::abinitio::Template::steal_frags(), and protocols::abinitio::Template::Template().