RotamerRecoveryMover.cc File Reference

A wrapper that measures how similar the rotamers are between before and after running the child mover. More...

#include <protocols/rotamer_recovery/RotamerRecoveryMover.hh>
#include <string>
#include <protocols/rotamer_recovery/RotamerRecoveryMoverCreator.hh>
#include <protocols/moves/Mover.hh>
#include <basic/datacache/DataMap.hh>
#include <protocols/rosetta_scripts/util.hh>
#include <protocols/rotamer_recovery/RotamerRecovery.hh>
#include <basic/Tracer.hh>
#include <core/conformation/Residue.hh>
#include <core/pack/pack_rotamers.hh>
#include <core/pack/task/PackerTask.hh>
#include <core/pack/task/TaskFactory.hh>
#include <core/pack/task/operation/TaskOperations.hh>
#include <core/scoring/ScoreFunction.hh>
#include <core/scoring/ScoreFunctionFactory.hh>
#include <core/types.hh>
#include <protocols/rotamer_recovery/RotamerRecoveryFactory.hh>
#include <protocols/rotamer_recovery/RRProtocol.hh>
#include <protocols/rotamer_recovery/RRProtocolMover.hh>
#include <protocols/rotamer_recovery/RRComparer.hh>
#include <protocols/rotamer_recovery/RRReporter.hh>
#include <basic/options/option.hh>
#include <basic/options/keys/in.OptionKeys.gen.hh>
#include <basic/options/keys/out.OptionKeys.gen.hh>
#include <basic/options/keys/corrections.OptionKeys.gen.hh>
#include <utility/vector1.hh>
#include <utility/exit.hh>
#include <utility/file/FileName.hh>
#include <utility/tag/Tag.hh>
#include <algorithm>
#include <iostream>
#include <core/kinematics/Jump.hh>
#include <utility/excn/Exceptions.hh>
#include <utility/vector0.hh>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::rotamer_recovery

Variables
static Tracer	protocols::rotamer_recovery::TR ("protocol.rotamer_recovery.RotamerRecoveryMover")

Detailed Description

A wrapper that measures how similar the rotamers are between before and after running the child mover.

Author

Matthew O'Meara (mattj.nosp@m.omea.nosp@m.ra@gm.nosp@m.ail..nosp@m.com) Adapted from: protocols::optimize_weights::IterativeOptEDriver::measure_rotamer_recovery() and apps::pilot::doug::rotamer_prediction_benchmark()