rotamer_recovery Directory Reference

Directory dependency graph for rotamer_recovery:

Files
file	RotamerRecovery.cc
file	RotamerRecovery.fwd.hh
	Measure how well rosetta is a recovering the conformation of an experimentally validated structure.
file	RotamerRecovery.hh
file	RotamerRecoveryCreator.cc
	Creator classes for components of the RotamerRecovery framework.
file	RotamerRecoveryCreator.fwd.hh
file	RotamerRecoveryCreator.hh
file	RotamerRecoveryFactory.cc
	Factory for creating RotamerRecoverys objects.
file	RotamerRecoveryFactory.fwd.hh
	report atom-atom pair geometry and scores to rotamer_recovery Statistics Scientific Benchmark
file	RotamerRecoveryFactory.hh
	Factory for creating RotamerRecovery objects.
file	RotamerRecoveryMover.cc
	A wrapper that measures how similar the rotamers are between before and after running the child mover.
file	RotamerRecoveryMover.fwd.hh
	Measure how well rosetta is a recovering the conformation of an experimentally validated structure.
file	RotamerRecoveryMover.hh
	A wrapper that measures how similar the rotamers are between before and after running the child mover.
file	RotamerRecoveryMoverCreator.hh
	This class will create instances of Mover ConstraintSetMover for the MoverFactory.
file	RRComparer.cc
file	RRComparer.fwd.hh
	Measure how well rosetta is a recovering the conformation of an experimentally validated structure.
file	RRComparer.hh
file	RRComparerAutomorphicRMSD.cc
file	RRComparerAutomorphicRMSD.fwd.hh
	Measure how well rosetta is a recovering the conformation of an experimentally validated structure by measuing the minimum root mean squared deviation of sidechain atoms for all chemical atomorphic forms.
file	RRComparerAutomorphicRMSD.hh
file	RRComparerElecDensDiff.cc
file	RRComparerElecDensDiff.fwd.hh
	Measure rotamer recovery by change in sidechain electron density correlation.
file	RRComparerElecDensDiff.hh
file	RRProtocol.cc
file	RRProtocol.fwd.hh
	Manage how the rotamer recovery test should be preformed.
file	RRProtocol.hh
file	RRProtocolMinPack.cc
file	RRProtocolMinPack.fwd.hh
	Preform the rotamer recovery test by minimizing each residue in a fixed context.
file	RRProtocolMinPack.hh
file	RRProtocolMover.cc
	Preform the rotamer recovery after applying mover.
file	RRProtocolMover.fwd.hh
	Preform the rotamer recovery after applying mover.
file	RRProtocolMover.hh
	Preform the rotamer recovery after applying mover.
file	RRProtocolPackRotamers.cc
file	RRProtocolPackRotamers.fwd.hh
	Preform the rotamer recovery test using the pack_rotamers discrete optimization algorithm.
file	RRProtocolPackRotamers.hh
file	RRProtocolReferenceStructure.cc
	Preform the rotamer recovery against a reference structure.
file	RRProtocolReferenceStructure.fwd.hh
	Preform the rotamer recovery after applying mover.
file	RRProtocolReferenceStructure.hh
	Preform the rotamer recovery against a reference structure.
file	RRProtocolRelax.cc
	Perform the rotamer recovery test using the FastRelax protocol.
file	RRProtocolRelax.fwd.hh
	Perform the rotamer recovery test using the FastRelax protocol.
file	RRProtocolRelax.hh
file	RRProtocolRotamerTrials.cc
file	RRProtocolRotamerTrials.fwd.hh
	Preform the rotamer recovery test by determining the lowest energy (discrete) rotamer for each residue in a fixed context.
file	RRProtocolRotamerTrials.hh
file	RRProtocolRTMin.cc
file	RRProtocolRTMin.fwd.hh
	Preform the rotamer recovery test by minimizing each residue in a fixed context.
file	RRProtocolRTMin.hh
file	RRReporter.cc
file	RRReporter.fwd.hh
file	RRReporter.hh
file	RRReporterHuman.cc
file	RRReporterHuman.fwd.hh
	Report how well rosetta is a recovering the conformation of an experimentally validated structure in a human readable format.
file	RRReporterHuman.hh
file	RRReporterSQLite.cc
file	RRReporterSQLite.fwd.hh
	Report Rotamer Recovery to an SQLite database.
file	RRReporterSQLite.hh