ligand_docking Directory Reference

Directory dependency graph for ligand_docking:

Directories
directory	ligand_options
directory	rdf

Files
file	AddHydrogen.cc
	Lemmon
file	AddHydrogen.fwd.hh
file	AddHydrogen.hh
file	AddHydrogens.cc
	Lemmon
file	AddHydrogens.fwd.hh
file	AddHydrogens.hh
file	AddHydrogensCreator.hh
	This class will create instances of Mover AddHydrogens for the MoverFactory.
file	AtomCountFilter.cc
	Find packing defects at an interface using packstat score terms.
file	AtomCountFilter.hh
	Find packing defects at an interface using packstat score terms.
file	AtomCountFilterCreator.hh
	FilterCreator for the AtomCountFilter.
file	ChainExistsFilter.cc
	Find packing defects at an interface using packstat score terms.
file	ChainExistsFilter.hh
	Find packing defects at an interface using packstat score terms.
file	ChainExistsFilterCreator.hh
	FilterCreator for the ChainExistsFilter.
file	CompleteConnectionsFilter.cc
file	CompleteConnectionsFilter.hh
file	CompleteConnectionsFilterCreator.hh
	FilterCreator for the CompleteConnectionsFilter.
file	CompoundTranslate.cc
file	CompoundTranslate.hh
file	CompoundTranslateCreator.hh
	This class will create instances of Mover CompoundTranslateCreator for the MoverFactory.
file	ComputeLigandRDF.cc
	A mover for computing RDF functions.
file	ComputeLigandRDF.fwd.hh
file	ComputeLigandRDF.hh
	header file for ComputeLigandRDF mover
file	ComputeLigandRDFCreator.hh
file	DistributionMap.cc
file	DistributionMap.hh
file	FinalMinimizer.cc
file	FinalMinimizer.fwd.hh
file	FinalMinimizer.hh
file	FinalMinimizerCreator.hh
	This class will create instances of Mover FinalMinimizerCreator for the MoverFactory.
file	grid_functions.cc
file	grid_functions.hh
file	GrowLigand.cc
	Lemmon
file	GrowLigand.fwd.hh
file	GrowLigand.hh
file	GrowLigandCreator.hh
	This class will create instances of Mover GrowLigand for the MoverFactory.
file	HBondAcceptorFilter.cc
	Find packing defects at an interface using packstat score terms.
file	HBondAcceptorFilter.hh
	Find packing defects at an interface using packstat score terms.
file	HBondAcceptorFilterCreator.hh
	FilterCreator for the HBondAcceptorFilter.
file	HBondDonorFilter.cc
	Find packing defects at an interface using packstat score terms.
file	HBondDonorFilter.hh
	Find packing defects at an interface using packstat score terms.
file	HBondDonorFilterCreator.hh
	FilterCreator for the HBondDonorFilter.
file	HeavyAtomFilter.cc
	Find packing defects at an interface using packstat score terms.
file	HeavyAtomFilter.hh
	Find packing defects at an interface using packstat score terms.
file	HeavyAtomFilterCreator.hh
	FilterCreator for the HeavyAtomFilter.
file	HighResDocker.cc
file	HighResDocker.fwd.hh
file	HighResDocker.hh
file	HighResDockerCreator.hh
	This class will create instances of Mover HighResDockerCreator for the MoverFactory.
file	InterfaceBuilder.cc
file	InterfaceBuilder.fwd.hh
file	InterfaceBuilder.hh
file	InterfaceScoreCalculator.cc
file	InterfaceScoreCalculator.fwd.hh
file	InterfaceScoreCalculator.hh
file	InterfaceScoreCalculatorCreator.hh
	This class will create instances of Mover InterfaceScoreCalculator for the MoverFactory.
file	ligand_dock_impl.cc
file	ligand_dock_impl.hh
file	ligand_functions.cc
file	ligand_functions.hh
file	ligand_scores.cc
file	ligand_scores.hh
file	LigandArea.cc
file	LigandArea.fwd.hh
file	LigandArea.hh
file	LigandBaseProtocol.cc
file	LigandBaseProtocol.hh
file	LigandDesign.cc
	Lemmon
file	LigandDesign.fwd.hh
file	LigandDesign.hh
file	LigandDesignCreator.hh
	This class will create instances of Mover LigandDesign for the MoverFactory.
file	LigandDockingLoaderCreators.hh
	Creator classes for the ligand docking DataLoader classes: InterfaceBuilderLoader and MoveMapBuilderLoader.
file	LigandDockingLoaders.cc
	Implementation of the InterfaceBuilderLoader and MoveMapBuilderLoader classes.
file	LigandDockingLoaders.hh
file	LigandDockProtocol.cc
file	LigandDockProtocol.fwd.hh
file	LigandDockProtocol.hh
file	MinimizeBackbone.cc
file	MinimizeBackbone.fwd.hh
file	MinimizeBackbone.hh
file	MinimizeBackboneCreator.hh
	This class will create instances of Mover MinimizeBackboneCreator for the MoverFactory.
file	MinimizeLigand.cc
file	MinimizeLigand.fwd.hh
file	MinimizeLigand.hh
file	MolarMassFilter.cc
	Find packing defects at an interface using packstat score terms.
file	MolarMassFilter.hh
	Find packing defects at an interface using packstat score terms.
file	MolarMassFilterCreator.hh
	FilterCreator for the MolarMassFilter.
file	MolecularMassFilter.cc
	Find packing defects at an interface using packstat score terms.
file	MolecularMassFilter.hh
	Find packing defects at an interface using packstat score terms.
file	MolecularMassFilterCreator.hh
	FilterCreator for the MolecularMassFilter.
file	MoveMapBuilder.cc
file	MoveMapBuilder.fwd.hh
file	MoveMapBuilder.hh
file	RandomConformerMover.cc
file	RandomConformerMover.fwd.hh
file	RandomConformerMover.hh
file	RandomConformers.cc
file	RandomConformers.hh
file	RandomConformersCreator.hh
	This class will create instances of Mover RandomConformersCreator for the MoverFactory.
file	ResidueTorsionRestraints.cc
file	ResidueTorsionRestraints.fwd.hh
file	ResidueTorsionRestraints.hh
file	RigidSearchMover.cc
file	RigidSearchMover.fwd.hh
file	RigidSearchMover.hh
file	Rotate.cc
file	Rotate.fwd.hh
file	Rotate.hh
file	RotateCreator.hh
	This class will create instances of Mover Rotate for the MoverFactory.
file	Rotates.cc
file	Rotates.fwd.hh
file	Rotates.hh
file	RotatesCreator.hh
	This class will create instances of Mover Rotates for the MoverFactory.
file	SlideTogether.cc
file	SlideTogether.hh
file	SlideTogetherCreator.hh
	This class will create instances of Mover SlideTogether for the MoverFactory.
file	StartFrom.cc
	a mover to place a ligand at defined position(s)
file	StartFrom.fwd.hh
file	StartFrom.hh
	a mover to place a ligand at a defined position
file	StartFromCreator.hh
	This class will create instances of Mover StartFrom for the MoverFactory.
file	TetherLigand.cc
file	TetherLigand.fwd.hh
file	TetherLigand.hh
file	Transform.cc
file	Transform.fwd.hh
file	Transform.hh
file	TransformCreator.hh
	This class will create instances of Mover Transform for the MoverFactory.
file	Translate.cc
file	Translate.fwd.hh
file	Translate.hh
file	TranslateCreator.hh
	This class will create instances of Mover Translate for the MoverFactory.
file	UnconstrainedTorsionsMover.cc
file	UnconstrainedTorsionsMover.fwd.hh
file	UnconstrainedTorsionsMover.hh
file	util.cc
file	util.hh
	Utilities for ligand docking.
file	WriteLigandMolFile.cc
	Ligand MolFile writer.
file	WriteLigandMolFile.fwd.hh
	forward header class for Ligand MolFile writer
file	WriteLigandMolFile.hh
	header class for Ligand MolFile writer
file	WriteLigandMolFileCreator.hh
	This class will create instances of Mover WriteLigandMolFile for the MoverFactory.