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D070_Refinement.py File Reference

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Namespaces

 demo.D070_Refinement
 

Functions

def demo.D070_Refinement.sample_refinement
 Methods. More...
 

Variables

tuple demo.D070_Refinement.parser = optparse.OptionParser()
 INTERPRETING RESULTS. More...
 
string demo.D070_Refinement.default = '../test/data/test_in.pdb'
 
string demo.D070_Refinement.help = 'the PDB file containing the protein to refine'
 
 demo.D070_Refinement.pdb_filename = options.pdb_filename
 
tuple demo.D070_Refinement.kT = float(options.kT)
 
tuple demo.D070_Refinement.smallmoves = int(options.smallmoves)
 
tuple demo.D070_Refinement.shearmoves = int(options.shearmoves)
 
tuple demo.D070_Refinement.backbone_angle_max = int(options.backbone_angle_max)
 
tuple demo.D070_Refinement.cycles = int(options.cycles)
 
tuple demo.D070_Refinement.jobs = int(options.jobs)
 
 demo.D070_Refinement.job_output = options.job_output