rna_cluster.cc File Reference

#include <core/types.hh>
#include <core/sequence/util.hh>
#include <basic/options/option.hh>
#include <basic/options/option_macros.hh>
#include <protocols/viewer/viewers.hh>
#include <core/init/init.hh>
#include <utility/vector1.hh>
#include <ObjexxFCL/string.functions.hh>
#include <core/chemical/ChemicalManager.fwd.hh>
#include <protocols/stepwise/modeler/align/StepWiseLegacyClustererSilentBased.hh>
#include <iostream>
#include <string>
#include <basic/options/keys/out.OptionKeys.gen.hh>
#include <basic/options/keys/in.OptionKeys.gen.hh>
#include <basic/options/keys/cluster.OptionKeys.gen.hh>
#include <core/chemical/ResidueType.hh>
#include <utility/excn/Exceptions.hh>

Go to the source code of this file.

Functions
void	cluster_test ()
void *	my_main (void *)
int	main (int argc, char *argv[])

Detailed Description

Author

Rhiju Das

Definition in file rna_cluster.cc.

Function Documentation

void cluster_test

(

)

Definition at line 56 of file rna_cluster.cc.

References basic::options::OptionKeys::cluster::auto_tune, basic::options::OptionKeys::cluster::cluster, basic::options::OptionKeys::remodel::cluster_radius, utility::io::oc::cout, out::nstruct(), option, options, basic::options::OptionKeys::cluster::radius, basic::options::OptionKeys::cluster::score_diff_cut, in::file::silent(), out::file::silent(), basic::options::OptionKeys::inout::dbms::user, and utility_exit_with_message.

Referenced by main(), and my_main().

int main	(	int	argc,
		char *	argv[]
	)

Definition at line 105 of file rna_cluster.cc.

References cluster::auto_tune(), utility::io::oc::cout, basic::init(), utility::excn::EXCN_Base::msg(), my_main(), out::nstruct(), option, options, cluster::radius(), cluster::score_diff_cut(), in::file::silent(), and out::file::silent().

void* my_main

(

void *

)

Definition at line 96 of file rna_cluster.cc.

References cluster_test(), and utility::options::OptionKeys::options::exit.

Referenced by main().