hybridization Directory Reference

Directory dependency graph for hybridization:

Files
file	AllResiduesChanged.hh [code]
file	BackboneTorsionPerturbation.cc [code]
file	BackboneTorsionPerturbation.hh [code]
	Declaration of the MoverCreator class for the BackboneTorsionPerturbation.
file	BackboneTorsionPerturbationCreator.hh [code]
file	BackboneTorsionSampler.cc [code]
file	BackboneTorsionSampler.hh [code]
	Declaration of the MoverCreator class for the BackboneTorsionSampler.
file	BackboneTorsionSamplerCreator.hh [code]
file	CartesianHybridize.cc [code]
file	CartesianHybridize.fwd.hh [code]
file	CartesianHybridize.hh [code]
file	CartesianSampler.cc [code]
file	CartesianSampler.fwd.hh [code]
file	CartesianSampler.hh [code]
file	ChunkTrialMover.cc [code]
	Wrapper for InsertChunkMover. It can take a random template and steal coordinates of all chunks or a random one.
file	ChunkTrialMover.fwd.hh [code]
file	ChunkTrialMover.hh [code]
	Wrapper for InsertChunkMover. It can take a random template and steal coordinates of all chunks or a random one.
file	DDomainParse.cc [code]
	A reimplementation of DDomain domain parsing algorithm, Protein Sci.16,947–955 (2007)
file	DDomainParse.hh [code]
	A reimplementation of DDomain domain parsing algorithm, Protein Sci.16,947–955 (2007)
file	DomainAssembly.cc [code]
	Domain Assembly.
file	DomainAssembly.fwd.hh [code]
file	DomainAssembly.hh [code]
file	FoldTreeHybridize.cc [code]
	Align a random jump to template.
file	FoldTreeHybridize.fwd.hh [code]
file	FoldTreeHybridize.hh [code]
	Align a random jump to template.
file	FragmentBiasAssigner.cc [code]
	take out the "compute_frag_bias()" from CartesianSampler
file	FragmentBiasAssigner.hh [code]
	take out the "compute_frag_bias()" from CartesianSampler
file	HybridizeFoldtreeDynamic.cc [code]
	A mover to dynamically manipulate fold tree during the template hybridization sampling.
file	HybridizeFoldtreeDynamic.fwd.hh [code]
file	HybridizeFoldtreeDynamic.hh [code]
file	HybridizeProtocol.cc [code]
file	HybridizeProtocol.fwd.hh [code]
file	HybridizeProtocol.hh [code]
	Add constraints to the current pose conformation.
file	HybridizeProtocolCreator.hh [code]
file	InsertChunkMover.cc [code]
	Align a random jump to template.
file	InsertChunkMover.hh [code]
	Align a random jump to template.
file	MRMover.cc [code]
file	MRMover.hh [code]
file	TemplateHistory.cc [code]
file	TemplateHistory.fwd.hh [code]
file	TemplateHistory.hh [code]
file	TMalign.cc [code]
	A reimplementation of TM-align algorithm.
file	TMalign.hh [code]
	A reimplementation of TM-align algorithm.
file	util.cc [code]
	Align a random jump to template.
file	util.hh [code]
	Align a random jump to template.
file	WeightedFragmentSmoothTrialMover.cc [code]
	Fragment insertion and trial, each residue has a customized weight for the frequency of insertion.
file	WeightedFragmentSmoothTrialMover.fwd.hh [code]
file	WeightedFragmentSmoothTrialMover.hh [code]
	Fragment insertion and trial, each residue has a customized weight for the frequency of insertion.
file	WeightedFragmentTrialMover.cc [code]
	Fragment insertion and trial, each residue has a customized weight for the frequency of insertion.
file	WeightedFragmentTrialMover.fwd.hh [code]
file	WeightedFragmentTrialMover.hh [code]
	Fragment insertion and trial, each residue has a customized weight for the frequency of insertion.