ligand_docking Directory Reference

Directory dependency graph for ligand_docking:

Directories
directory	ligand_options
directory	rdf

Files
file	AddHydrogen.cc [code]
	Lemmon
file	AddHydrogen.fwd.hh [code]
file	AddHydrogen.hh [code]
file	AddHydrogens.cc [code]
	Lemmon
file	AddHydrogens.fwd.hh [code]
file	AddHydrogens.hh [code]
file	AddHydrogensCreator.hh [code]
	This class will create instances of Mover AddHydrogens for the MoverFactory.
file	AtomCountFilter.cc [code]
	Find packing defects at an interface using packstat score terms.
file	AtomCountFilter.hh [code]
	Find packing defects at an interface using packstat score terms.
file	AtomCountFilterCreator.hh [code]
	FilterCreator for the AtomCountFilter.
file	ChainExistsFilter.cc [code]
	Find packing defects at an interface using packstat score terms.
file	ChainExistsFilter.hh [code]
	Find packing defects at an interface using packstat score terms.
file	ChainExistsFilterCreator.hh [code]
	FilterCreator for the ChainExistsFilter.
file	CompleteConnectionsFilter.cc [code]
file	CompleteConnectionsFilter.hh [code]
file	CompleteConnectionsFilterCreator.hh [code]
	FilterCreator for the CompleteConnectionsFilter.
file	CompoundTranslate.cc [code]
file	CompoundTranslate.hh [code]
file	CompoundTranslateCreator.hh [code]
	This class will create instances of Mover CompoundTranslateCreator for the MoverFactory.
file	ComputeLigandRDF.cc [code]
	A mover for computing RDF functions.
file	ComputeLigandRDF.fwd.hh [code]
file	ComputeLigandRDF.hh [code]
	header file for ComputeLigandRDF mover
file	ComputeLigandRDFCreator.hh [code]
file	DistributionMap.cc [code]
file	DistributionMap.hh [code]
file	FinalMinimizer.cc [code]
file	FinalMinimizer.fwd.hh [code]
file	FinalMinimizer.hh [code]
file	FinalMinimizerCreator.hh [code]
	This class will create instances of Mover FinalMinimizerCreator for the MoverFactory.
file	grid_functions.cc [code]
file	grid_functions.hh [code]
file	GrowLigand.cc [code]
	Lemmon
file	GrowLigand.fwd.hh [code]
file	GrowLigand.hh [code]
file	GrowLigandCreator.hh [code]
	This class will create instances of Mover GrowLigand for the MoverFactory.
file	HBondAcceptorFilter.cc [code]
	Find packing defects at an interface using packstat score terms.
file	HBondAcceptorFilter.hh [code]
	Find packing defects at an interface using packstat score terms.
file	HBondAcceptorFilterCreator.hh [code]
	FilterCreator for the HBondAcceptorFilter.
file	HBondDonorFilter.cc [code]
	Find packing defects at an interface using packstat score terms.
file	HBondDonorFilter.hh [code]
	Find packing defects at an interface using packstat score terms.
file	HBondDonorFilterCreator.hh [code]
	FilterCreator for the HBondDonorFilter.
file	HeavyAtomFilter.cc [code]
	Find packing defects at an interface using packstat score terms.
file	HeavyAtomFilter.hh [code]
	Find packing defects at an interface using packstat score terms.
file	HeavyAtomFilterCreator.hh [code]
	FilterCreator for the HeavyAtomFilter.
file	HighResDocker.cc [code]
file	HighResDocker.fwd.hh [code]
file	HighResDocker.hh [code]
file	HighResDockerCreator.hh [code]
	This class will create instances of Mover HighResDockerCreator for the MoverFactory.
file	InterfaceBuilder.cc [code]
file	InterfaceBuilder.fwd.hh [code]
file	InterfaceBuilder.hh [code]
file	InterfaceScoreCalculator.cc [code]
file	InterfaceScoreCalculator.fwd.hh [code]
file	InterfaceScoreCalculator.hh [code]
file	InterfaceScoreCalculatorCreator.hh [code]
	This class will create instances of Mover InterfaceScoreCalculator for the MoverFactory.
file	ligand_dock_impl.cc [code]
file	ligand_dock_impl.hh [code]
file	ligand_functions.cc [code]
file	ligand_functions.hh [code]
file	ligand_scores.cc [code]
file	ligand_scores.hh [code]
file	LigandArea.cc [code]
file	LigandArea.fwd.hh [code]
file	LigandArea.hh [code]
file	LigandBaseProtocol.cc [code]
file	LigandBaseProtocol.hh [code]
file	LigandDesign.cc [code]
	Lemmon
file	LigandDesign.fwd.hh [code]
file	LigandDesign.hh [code]
file	LigandDesignCreator.hh [code]
	This class will create instances of Mover LigandDesign for the MoverFactory.
file	LigandDockingLoaderCreators.hh [code]
	Creator classes for the ligand docking DataLoader classes: InterfaceBuilderLoader and MoveMapBuilderLoader.
file	LigandDockingLoaders.cc [code]
	Implementation of the InterfaceBuilderLoader and MoveMapBuilderLoader classes.
file	LigandDockingLoaders.hh [code]
file	LigandDockProtocol.cc [code]
file	LigandDockProtocol.fwd.hh [code]
file	LigandDockProtocol.hh [code]
file	MinimizeBackbone.cc [code]
file	MinimizeBackbone.fwd.hh [code]
file	MinimizeBackbone.hh [code]
file	MinimizeBackboneCreator.hh [code]
	This class will create instances of Mover MinimizeBackboneCreator for the MoverFactory.
file	MinimizeLigand.cc [code]
file	MinimizeLigand.fwd.hh [code]
file	MinimizeLigand.hh [code]
file	MolarMassFilter.cc [code]
	Find packing defects at an interface using packstat score terms.
file	MolarMassFilter.hh [code]
	Find packing defects at an interface using packstat score terms.
file	MolarMassFilterCreator.hh [code]
	FilterCreator for the MolarMassFilter.
file	MolecularMassFilter.cc [code]
	Find packing defects at an interface using packstat score terms.
file	MolecularMassFilter.hh [code]
	Find packing defects at an interface using packstat score terms.
file	MolecularMassFilterCreator.hh [code]
	FilterCreator for the MolecularMassFilter.
file	MoveMapBuilder.cc [code]
file	MoveMapBuilder.fwd.hh [code]
file	MoveMapBuilder.hh [code]
file	RandomConformerMover.cc [code]
file	RandomConformerMover.fwd.hh [code]
file	RandomConformerMover.hh [code]
file	RandomConformers.cc [code]
file	RandomConformers.hh [code]
file	RandomConformersCreator.hh [code]
	This class will create instances of Mover RandomConformersCreator for the MoverFactory.
file	ResidueTorsionRestraints.cc [code]
file	ResidueTorsionRestraints.fwd.hh [code]
file	ResidueTorsionRestraints.hh [code]
file	RigidSearchMover.cc [code]
file	RigidSearchMover.fwd.hh [code]
file	RigidSearchMover.hh [code]
file	Rotate.cc [code]
file	Rotate.fwd.hh [code]
file	Rotate.hh [code]
file	RotateCreator.hh [code]
	This class will create instances of Mover Rotate for the MoverFactory.
file	Rotates.cc [code]
file	Rotates.fwd.hh [code]
file	Rotates.hh [code]
file	RotatesCreator.hh [code]
	This class will create instances of Mover Rotates for the MoverFactory.
file	SlideTogether.cc [code]
file	SlideTogether.hh [code]
file	SlideTogetherCreator.hh [code]
	This class will create instances of Mover SlideTogether for the MoverFactory.
file	StartFrom.cc [code]
	a mover to place a ligand at defined position(s)
file	StartFrom.fwd.hh [code]
file	StartFrom.hh [code]
	a mover to place a ligand at a defined position
file	StartFromCreator.hh [code]
	This class will create instances of Mover StartFrom for the MoverFactory.
file	TetherLigand.cc [code]
file	TetherLigand.fwd.hh [code]
file	TetherLigand.hh [code]
file	Transform.cc [code]
file	Transform.fwd.hh [code]
file	Transform.hh [code]
file	TransformCreator.hh [code]
	This class will create instances of Mover Transform for the MoverFactory.
file	Translate.cc [code]
file	Translate.fwd.hh [code]
file	Translate.hh [code]
file	TranslateCreator.hh [code]
	This class will create instances of Mover Translate for the MoverFactory.
file	UnconstrainedTorsionsMover.cc [code]
file	UnconstrainedTorsionsMover.fwd.hh [code]
file	UnconstrainedTorsionsMover.hh [code]
file	util.cc [code]
file	util.hh [code]
	Utilities for ligand docking.
file	WriteLigandMolFile.cc [code]
	Ligand MolFile writer.
file	WriteLigandMolFile.fwd.hh [code]
	forward header class for Ligand MolFile writer
file	WriteLigandMolFile.hh [code]
	header class for Ligand MolFile writer
file	WriteLigandMolFileCreator.hh [code]
	This class will create instances of Mover WriteLigandMolFile for the MoverFactory.