antibody Directory Reference

Directory dependency graph for antibody:

Directories
directory	clusters
directory	constraints
directory	database
directory	design
directory	grafting
directory	snugdock
directory	task_operations

Files
file	Ab_TemplateInfo.cc [code]
file	Ab_TemplateInfo.fwd.hh [code]
file	Ab_TemplateInfo.hh [code]
file	AntibodyCDRGrafter.cc [code]
	Class to graft CDR loops from an antibody to a new antibody or from a CDR pose into a different antibody.
file	AntibodyCDRGrafter.fwd.hh [code]
	Class to graft CDR loops from an antibody to a new antibody or from a CDR pose into a different antibody.
file	AntibodyCDRGrafter.hh [code]
	Class to graft CDR loops from an antibody to a new antibody or from a CDR pose into a different antibody.
file	AntibodyCDRGrafterCreator.hh [code]
	Class to graft CDR loops from an antibody to a new antibody or from a CDR pose into a different antibody.
file	AntibodyEnum.hh [code]
	Enumerators + TypeDefs for Antibody namespace.
file	AntibodyEnumManager.cc [code]
	Functions for AntibodyEnumerators.
file	AntibodyEnumManager.fwd.hh [code]
file	AntibodyEnumManager.hh [code]
	Functions for AntibodyEnumerators.
file	AntibodyFeatures.cc [code]
file	AntibodyFeatures.fwd.hh [code]
file	AntibodyFeatures.hh [code]
file	AntibodyFeaturesCreator.cc [code]
file	AntibodyFeaturesCreator.hh [code]
file	AntibodyInfo.cc [code]
	Class for getting antibody-specific objects and information.
file	AntibodyInfo.fwd.hh [code]
	AntibodyInfo class forward declarations header.
file	AntibodyInfo.hh [code]
	Class for getting antibody-specific objects and information.
file	AntibodyModelerProtocol.cc [code]
	Build a homology model of an antibody.
file	AntibodyModelerProtocol.fwd.hh [code]
	forward declaration
file	AntibodyModelerProtocol.hh [code]
	Build a homology model of an antibody.
file	AntibodyNumberingParser.cc [code]
file	AntibodyNumberingParser.fwd.hh [code]
file	AntibodyNumberingParser.hh [code]
	Read Antibody Numbering schemes and transform info from the database.
file	CDRsMinPackMin.cc [code]
	Build a homology model of an antibody.
file	CDRsMinPackMin.fwd.hh [code]
	forward declaration
file	CDRsMinPackMin.hh [code]
	Main CDR minimization method in protocols/antibody.
file	CloseOneCDRLoop.cc [code]
	grafts a cdr onto the template of an antibody framework
file	CloseOneCDRLoop.fwd.hh [code]
file	CloseOneCDRLoop.hh [code]
file	GraftCDRLoopsProtocol.cc [code]
	Build a homology model of an antibody.
file	GraftCDRLoopsProtocol.fwd.hh [code]
	forward declaration
file	GraftCDRLoopsProtocol.hh [code]
	Build a homology model of an antibody.
file	GraftedStemOptimizer.cc [code]
	Optimize the CDR Grafted stem.
file	GraftedStemOptimizer.fwd.hh [code]
file	GraftedStemOptimizer.hh [code]
	Optimize the CDR Grafted stem.
file	GraftOneCDRLoop.cc [code]
	grafts a cdr onto the template of an antibody framework
file	GraftOneCDRLoop.fwd.hh [code]
file	GraftOneCDRLoop.hh [code]
	grafts a cdr onto the template of an antibody framework
file	H3CterInsert.cc [code]
	Build a homology model of an antibody.
file	H3CterInsert.fwd.hh [code]
	Build a homology model of an antibody.
file	H3CterInsert.hh [code]
	Build a homology model of an antibody.
file	H3PerturbCCD.cc [code]
	Build a homology model of an antibody.
file	H3PerturbCCD.fwd.hh [code]
file	H3PerturbCCD.hh [code]
	Build a homology model of an antibody.
file	H3RefineCCD.cc [code]
	Build a homology model of an antibody.
file	H3RefineCCD.fwd.hh [code]
file	H3RefineCCD.hh [code]
	Build a homology model of an antibody.
file	LHRepulsiveRamp.cc [code]
	Build a homology model of an antibody.
file	LHRepulsiveRamp.fwd.hh [code]
file	LHRepulsiveRamp.hh [code]
	Build a homology model of an antibody.
file	metrics.cc [code]
	Routines to measure antibodies.
file	metrics.hh [code]
file	ModelCDRH3.cc [code]
	models CDR H3 loop using loop modeling
file	ModelCDRH3.fwd.hh [code]
file	ModelCDRH3.hh [code]
file	RefineBetaBarrel.cc [code]
	Build a homology model of an antibody.
file	RefineBetaBarrel.fwd.hh [code]
	forward declaration
file	RefineBetaBarrel.hh [code]
	Build a homology model of an antibody.
file	RefineOneCDRLoop.cc [code]
	Build a homology model of an antibody.
file	RefineOneCDRLoop.fwd.hh [code]
file	RefineOneCDRLoop.hh [code]
	Build a homology model of an antibody.
file	RefineOneCDRLoopCentroid.cc [code]
	Build a homology model of an antibody.
file	RefineOneCDRLoopCentroid.fwd.hh [code]
file	RefineOneCDRLoopCentroid.hh [code]
	Build a homology model of an antibody.
file	util.cc [code]
file	util.hh [code]
	Utility functions for the Antibody namespace.