simple_filters Directory Reference

Directory dependency graph for simple_filters:

Files
file	AbinitioBaseFilter.cc [code]
file	AbinitioBaseFilter.hh [code]
	header file for AbinitioBaseFilter.cc
file	AlaScan.cc [code]
file	AlaScan.fwd.hh [code]
file	AlaScan.hh [code]
	definition of filter class AlsScan.
file	AlaScanCreator.hh [code]
	FilterCreators for the AlaScanCreator.
file	AngleToVectorFilter.cc [code]
file	AngleToVectorFilter.fwd.hh [code]
file	AngleToVectorFilter.hh [code]
file	AngleToVectorFilterCreator.hh [code]
	FilterCreators for the AngleToVectorFilter.
file	AtomicContactFilter.cc [code]
file	AtomicContactFilter.hh [code]
file	AtomicContactFilterCreator.hh [code]
	FilterCreator for the AtomicContactFilter.
file	AtomicDistanceFilter.cc [code]
file	AtomicDistanceFilter.hh [code]
	Filter for looking at specific atom distances.
file	AtomicDistanceFilterCreator.hh [code]
	FilterCreator for the AtomicDistanceFilter.
file	AveragePathLengthFilter.cc [code]
	Filter on the average covalent path length between residues, including disulfides.
file	AveragePathLengthFilter.fwd.hh [code]
	Filter on the average covalent path length between residues, including disulfides.
file	AveragePathLengthFilter.hh [code]
	Filter on the average covalent path length between residues, including disulfides.
file	AveragePathLengthFilterCreator.hh [code]
	FilterCreators for the AveragePathLengthFilter.
file	BatchNrEvaluator.cc [code]
file	BatchNrEvaluator.hh [code]
file	BuriedUnsatHbondFilter.cc [code]
file	BuriedUnsatHbondFilter.fwd.hh [code]
file	BuriedUnsatHbondFilter.hh [code]
	definition of filter class BuriedUnsatHbondFilter.
file	BuriedUnsatHbondFilterCreator.hh [code]
	FilterCreators for the BuriedUnsatHbondFilterCreator.
file	CamShiftEvaluator.cc [code]
file	CamShiftEvaluator.hh [code]
file	CamShiftEvaluatorCreator.cc [code]
file	CamShiftEvaluatorCreator.hh [code]
	Header for CamShiftEvaluatorCreator.
file	ChiWellRmsdEvaluator.cc [code]
file	ChiWellRmsdEvaluator.hh [code]
file	ChiWellRmsdEvaluatorCreator.cc [code]
file	ChiWellRmsdEvaluatorCreator.hh [code]
	Header for ChiWellRmsdEvaluatorCreator.
file	COFilter.cc [code]
	runs reject or accept filters on pose
file	COFilter.hh [code]
file	ConservedPosMutationFilter.cc [code]
file	ConservedPosMutationFilter.fwd.hh [code]
file	ConservedPosMutationFilter.hh [code]
	header file for ConservedPosMutationFitler class.
file	ConservedPosMutationFilterCreator.hh [code]
	FilterCreator for the ConservedPosMutationFilter.
file	ConstraintScoreCutoffFilter.cc [code]
file	ConstraintScoreCutoffFilter.fwd.hh [code]
file	ConstraintScoreCutoffFilter.hh [code]
	header file for ConstraintScoreCutoffFitler class.
file	ConstraintScoreCutoffFilterCreator.hh [code]
	FilterCreator for the ConstraintScoreCutoffFilter.
file	ContactMapEvaluator.cc [code]
file	ContactMapEvaluator.hh [code]
file	ContactMapEvaluatorCreator.cc [code]
file	ContactMapEvaluatorCreator.hh [code]
	Header for ContactMapEvaluatorCreator.
file	DdgFilter.cc [code]
file	DdgFilter.fwd.hh [code]
file	DdgFilter.hh [code]
	definition of filter class DdgFilter.
file	DdgFilterCreator.hh [code]
	FilterCreators for the DdgFilterCreator.
file	DdGScan.cc [code]
file	DdGScan.fwd.hh [code]
file	DdGScan.hh [code]
	definition of filter class DdGScan.
file	DdGScanCreator.hh [code]
	FilterCreators for the DdGScanCreator.
file	DeltaFilter.cc [code]
file	DeltaFilter.fwd.hh [code]
	forward declaration for DeltaFilter
file	DeltaFilter.hh [code]
	Reports the average degree of connectivity of interface residues.
file	DeltaFilterCreator.hh [code]
	FilterCreators for the DeltaFilter.
file	DisulfideEntropyFilter.cc [code]
	Filter on the entropic effect of disulfide linkage.
file	DisulfideEntropyFilter.fwd.hh [code]
	Filter on the entropic effect of disulfide linkage.
file	DisulfideEntropyFilter.hh [code]
	Filter on the entropic effect of disulfide linkage.
file	DisulfideEntropyFilterCreator.hh [code]
	FilterCreators for the DisulfideEntropyFilter.
file	DomainInterfaceFilter.cc [code]
	Implementation of DomainInterfaceFilter which checks whether a defined region of a protein is part of an interface with a pre-defined other domain of the protein.
file	DomainInterfaceFilter.fwd.hh [code]
	forward declaration for DomainInterfaceFilter which checks if a query region is part of an an interface with a pre-defined other domain of a protein.
file	DomainInterfaceFilter.hh [code]
	header file for DomainInterfaceFilter which checks whether a defined region of a protein is buried in an interface by evaluating the number of non-water neighbors of all residues
file	EnergyPerResidueFilter.cc [code]
file	EnergyPerResidueFilter.fwd.hh [code]
file	EnergyPerResidueFilter.hh [code]
	definition of filter class EnergyPerResidueFilter.
file	EnergyPerResidueFilterCreator.hh [code]
	FilterCreators for the EnergyPerResidueFilterCreator.
file	EvaluatedTrialMover.cc [code]
file	EvaluatedTrialMover.hh [code]
file	ExpiryFilter.cc [code]
file	ExpiryFilter.fwd.hh [code]
file	ExpiryFilter.hh [code]
	Simple filter that tests whether a file exists. Useful to test whether we're recovering from a checkpoint.
file	ExpiryFilterCreator.hh [code]
	FilterCreators for the ExpiryFilter.
file	ExternalEvaluator.cc [code]
file	ExternalEvaluator.hh [code]
file	ExtraScoreEvaluatorCreator.cc [code]
file	ExtraScoreEvaluatorCreator.hh [code]
	Header for ExtraScoreEvaluatorCreator.
file	FileExistFilter.cc [code]
file	FileExistFilter.fwd.hh [code]
file	FileExistFilter.hh [code]
	Simple filter that tests whether a file exists. Useful to test whether we're recovering from a checkpoint.
file	FileExistFilterCreator.hh [code]
	FilterCreators for the FileExistFilter.
file	FileRemoveFilter.cc [code]
file	FileRemoveFilter.fwd.hh [code]
file	FileRemoveFilter.hh [code]
	Simple filter that tests whether a file exists. Useful to test whether we're recovering from a checkpoint.
file	FileRemoveFilterCreator.hh [code]
	FilterCreators for the FileRemoveFilter.
file	GeometryFilter.cc [code]
file	GeometryFilter.fwd.hh [code]
file	GeometryFilter.hh [code]
	definition of filter class GeometryFilter.
file	GeometryFilterCreator.hh [code]
	FilterCreators for the GeometryFilterCreator.
file	HolesFilter.cc [code]
file	HolesFilter.fwd.hh [code]
	filter structures by will's hole score
file	HolesFilter.hh [code]
	header file for HolesFilter class.
file	HolesFilterCreator.hh [code]
	FilterCreator for the HolesFilter.
file	InterfaceBindingEnergyDensityFilter.cc [code]
	Implementation of the binding-energy-density filter.
file	InterfaceBindingEnergyDensityFilter.fwd.hh [code]
	Forward declaration and typedefs for InterfaceBindingEnergyDensityFilter.
file	InterfaceBindingEnergyDensityFilter.hh [code]
	Filter class for looking at the dGbind/dSASA ratio.
file	InterfaceBindingEnergyDensityFilterCreator.hh [code]
	FilterCreators for the InterfaceBindingEnergyDensityFilterCreator.
file	InterfaceSasaFilter.cc [code]
file	InterfaceSasaFilter.fwd.hh [code]
file	InterfaceSasaFilter.hh [code]
	definition of filter class InterfaceSasaFilter.
file	InterfaceSasaFilterCreator.hh [code]
	FilterCreators for the InterfaceSasaFilterCreator.
file	InterRepeatContactFilter.cc [code]
file	InterRepeatContactFilter.fwd.hh [code]
file	InterRepeatContactFilter.hh [code]
file	InterRepeatContactFilterCreator.hh [code]
file	IntraRepeatContactFilter.cc [code]
file	IntraRepeatContactFilter.fwd.hh [code]
file	IntraRepeatContactFilter.hh [code]
file	IntraRepeatContactFilterCreator.hh [code]
file	JScoreEvaluator.cc [code]
file	JScoreEvaluator.hh [code]
file	JScoreEvaluatorCreator.cc [code]
file	JScoreEvaluatorCreator.hh [code]
	Header for JScoreEvaluatorCreator.
file	JumpEvaluator.cc [code]
file	JumpEvaluator.hh [code]
file	JumpNrEvaluatorCreator.cc [code]
file	JumpNrEvaluatorCreator.hh [code]
	Header for JumpNrEvaluatorCreator.
file	LeastNativeLike9merFilter.cc [code]
file	LeastNativeLike9merFilter.fwd.hh [code]
file	LeastNativeLike9merFilter.hh [code]
	Find the rmsd to the worst 9mer in the chain.
file	LeastNativeLike9merFilterCreator.hh [code]
file	MotifScoreFilter.cc [code]
	Scores poses using will's motifScore.
file	MotifScoreFilter.fwd.hh [code]
file	MotifScoreFilter.hh [code]
file	MotifScoreFilterCreator.hh [code]
file	MultipleSigmoidsFilter.cc [code]
file	MultipleSigmoidsFilter.fwd.hh [code]
file	MultipleSigmoidsFilter.hh [code]
file	MultipleSigmoidsFilterCreator.hh [code]
	FilterCreators for the MultipleSigmoidsFilter.
file	MutationsFilter.cc [code]
file	MutationsFilter.fwd.hh [code]
	forward declaration for MutationsFilter
file	MutationsFilter.hh [code]
	A filter to return the number of mutated positions within a given set of designable resdues.
file	MutationsFilterCreator.hh [code]
	FilterCreators for the MutationsFilter.
file	NativeEvaluatorCreator.cc [code]
file	NativeEvaluatorCreator.hh [code]
	Header for NativeEvaluatorCreator.
file	NeighborTypeFilter.cc [code]
file	NeighborTypeFilter.fwd.hh [code]
file	NeighborTypeFilter.hh [code]
	definition of filter class InterfaceSasaFilter.
file	NeighborTypeFilterCreator.hh [code]
	FilterCreators for the NeighborTypeFilterCreator.
file	NetChargeFilter.cc [code]
file	NetChargeFilter.fwd.hh [code]
file	NetChargeFilter.hh [code]
	definition of filter class NetChargeFilter.
file	NetChargeFilterCreator.hh [code]
	FilterCreators for the NetChargeFilterCreator.
file	NMerPSSMEnergyFilter.cc [code]
file	NMerPSSMEnergyFilter.fwd.hh [code]
file	NMerPSSMEnergyFilter.hh [code]
	definition of filter class NMerPSSMEnergyFilter.
file	NMerPSSMEnergyFilterCreator.hh [code]
	FilterCreators for the NMerPSSMEnergyFilter.
file	NMerSVMEnergyFilter.cc [code]
file	NMerSVMEnergyFilter.fwd.hh [code]
file	NMerSVMEnergyFilter.hh [code]
	definition of filter class NMerSVMEnergyFilter.
file	NMerSVMEnergyFilterCreator.hh [code]
	FilterCreators for the NMerSVMEnergyFilter.
file	NonSequentialNeighborsFilter.cc [code]
file	NonSequentialNeighborsFilter.fwd.hh [code]
file	NonSequentialNeighborsFilter.hh [code]
	Simple filter that tests whether a file exists. Useful to test whether we're recovering from a checkpoint.
file	NonSequentialNeighborsFilterCreator.hh [code]
	FilterCreators for the NonSequentialNeighborsFilter.
file	OperatorFilter.cc [code]
file	OperatorFilter.fwd.hh [code]
file	OperatorFilter.hh [code]
file	OperatorFilterCreator.hh [code]
	FilterCreators for the OperatorFilter.
file	PackerNeighborGraphFilter.cc [code]
file	PackerNeighborGraphFilter.hh [code]
	header file for packer neighbor graph based filter
file	PackStatFilter.cc [code]
file	PackStatFilter.fwd.hh [code]
file	PackStatFilter.hh [code]
	header file for PackStatFilter class.
file	PackStatFilterCreator.hh [code]
	FilterCreator for the PackStatFilter.
file	PalesEvaluator.cc [code]
file	PalesEvaluator.hh [code]
file	PalesEvaluatorCreator.cc [code]
file	PalesEvaluatorCreator.hh [code]
	Header for PalesEvaluatorCreator.
file	PDDFScoreFilter.cc [code]
	runs reject or accept filters on pose
file	PDDFScoreFilter.fwd.hh [code]
file	PDDFScoreFilter.hh [code]
file	PoolEvaluatorCreator.cc [code]
file	PoolEvaluatorCreator.hh [code]
	Header for PoolEvaluatorCreator.
file	PoseCommentFilter.cc [code]
file	PoseCommentFilter.fwd.hh [code]
file	PoseCommentFilter.hh [code]
file	PoseCommentFilterCreator.hh [code]
	FilterCreators for the PoseCommentFilter.
file	PoseInfoFilter.cc [code]
file	PoseInfoFilter.hh [code]
	Filter for outputing information about the pose.
file	PoseInfoFilterCreator.hh [code]
	FilterCreator for the PoseInfoFilter.
file	PoseMetricEvaluator.hh [code]
file	PredictedBurialEvaluator.cc [code]
file	PredictedBurialEvaluator.hh [code]
file	PredictedBurialFnEvaluatorCreator.cc [code]
file	PredictedBurialFnEvaluatorCreator.hh [code]
	Header for PredictedBurialFnEvaluatorCreator.
file	RangeFilter.cc [code]
file	RangeFilter.fwd.hh [code]
file	RangeFilter.hh [code]
	Range filter evaluates if the return value of a particular filter is between a specific range.
file	RangeFilterCreator.hh [code]
	FilterCreator for the RangeFilter.
file	RDC_Evaluator.cc [code]
file	RDC_Evaluator.fwd.hh [code]
file	RDC_Evaluator.hh [code]
file	RdcEvaluatorCreator.cc [code]
file	RdcEvaluatorCreator.hh [code]
	Header for RdcEvaluatorCreator.
file	RdcSelectEvaluatorCreator.cc [code]
file	RdcSelectEvaluatorCreator.hh [code]
	Header for RdcSelectEvaluatorCreator.
file	RdcTargetEvaluatorCreator.cc [code]
file	RdcTargetEvaluatorCreator.hh [code]
	Header for RdcTargetEvaluatorCreator.
file	RelativePoseFilter.cc [code]
file	RelativePoseFilter.fwd.hh [code]
file	RelativePoseFilter.hh [code]
	Computes a filter's value on a pose that is modified from one that is read from disk. Useful for computing values for the same sequence across many structures.
file	RelativePoseFilterCreator.hh [code]
file	RepeatParameterFilter.cc [code]
	can filter a pose for the rise, run and omega. Many of the functions have been stolen from RepeatGlobalFrame but made const to work with filter obejcts.
file	RepeatParameterFilter.fwd.hh [code]
	forward declaration for RepeatParameterFilter
file	RepeatParameterFilter.hh [code]
	Simple filter that tests whether a file exists. Useful to test whether we're recovering from a checkpoint.
file	RepeatParameterFilterCreator.hh [code]
file	ReportFilter.cc [code]
file	ReportFilter.fwd.hh [code]
file	ReportFilter.hh [code]
	Simple filter that tests whether a file exists. Useful to test whether we're recovering from a checkpoint.
file	ReportFilterCreator.hh [code]
	FilterCreators for the ReportFilter.
file	ResidueBurialFilter.cc [code]
file	ResidueBurialFilter.fwd.hh [code]
file	ResidueBurialFilter.hh [code]
	definition of filter class ResidueBurialFilter.
file	ResidueBurialFilterCreator.hh [code]
	FilterCreator for the ResidueBurialFilter.
file	ResidueCountFilter.cc [code]
	Filter on the total number of residues in the structure.
file	ResidueCountFilter.fwd.hh [code]
	Filter on the total number of residues in the structure.
file	ResidueCountFilter.hh [code]
	Filter on the total number of residues in the structure.
file	ResidueCountFilterCreator.hh [code]
	FilterCreators for the ResidueCountFilter.
file	ResidueDistanceFilter.cc [code]
file	ResidueDistanceFilter.fwd.hh [code]
file	ResidueDistanceFilter.hh [code]
	definition of filter class ResidueDistanceFilter.
file	ResidueDistanceFilterCreator.hh [code]
	FilterCreator for the ResidueDistanceFilter.
file	ResidueIEFilter.cc [code]
file	ResidueIEFilter.fwd.hh [code]
file	ResidueIEFilter.hh [code]
	definition of filter class ResidueIEFilter.
file	ResidueIEFilterCreator.hh [code]
	FilterCreators for the ResidueIEFilterCreator.
file	ResidueSetChainEnergyFilter.cc [code]
file	ResidueSetChainEnergyFilter.fwd.hh [code]
file	ResidueSetChainEnergyFilter.hh [code]
	definition of filter class ResidueSetChainEnergyFilter.
file	ResidueSetChainEnergyFilterCreator.hh [code]
	FilterCreators for the ResidueSetChainEnergyFilter.
file	ResiduesInInterfaceFilter.cc [code]
file	ResiduesInInterfaceFilter.fwd.hh [code]
file	ResiduesInInterfaceFilter.hh [code]
	Reports to Tracer which residues are designable in a taskfactory.
file	ResiduesInInterfaceFilterCreator.hh [code]
	FilterCreators for the ResiduesInInterfaceFilter.
file	RGFilter.cc [code]
	runs reject or accept filters on pose
file	RGFilter.hh [code]
file	RmsdEvaluator.cc [code]
file	RmsdEvaluator.hh [code]
file	RmsdEvaluatorCreator.cc [code]
file	RmsdEvaluatorCreator.hh [code]
	Header for RmsdEvaluatorCreator.
file	RmsdTargetEvaluatorCreator.cc [code]
file	RmsdTargetEvaluatorCreator.hh [code]
	Header for RmsdTargetEvaluatorCreator.
file	RotamerBoltzmannWeight.cc [code]
file	RotamerBoltzmannWeight.fwd.hh [code]
file	RotamerBoltzmannWeight.hh [code]
	Reports to Tracer which residues are designable in a taskfactory.
file	RotamerBoltzmannWeightFilterCreator.hh [code]
	FilterCreators for the RotamerBoltzmannWeightFilter.
file	SavePoseConstraintToFileFilter.cc [code]
file	SavePoseConstraintToFileFilter.hh [code]
	Filter for outputing information about the pose.
file	SavePoseConstraintToFileFilterCreator.hh [code]
	FilterCreator for the SavePoseConstraintToFileFilter.
file	SaveResfileToDiskFilter.cc [code]
	Outputs a resfile based on a given set of taskoperations.
file	SaveResfileToDiskFilter.fwd.hh [code]
file	SaveResfileToDiskFilter.hh [code]
	header file for SaveResfileToDiskFilter class
file	SaveResfileToDiskFilterCreator.hh [code]
	FilterCreator for the SaveResfileToDiskFilter.
file	SAXSScoreFilter.cc [code]
	runs reject or accept filters on pose
file	SAXSScoreFilter.fwd.hh [code]
file	SAXSScoreFilter.hh [code]
file	ScoreCutoffFilter.cc [code]
file	ScoreCutoffFilter.fwd.hh [code]
file	ScoreCutoffFilter.hh [code]
	header file for ScoreCutoffFitler class.
file	ScoreCutoffFilterCreator.hh [code]
	FilterCreator for the ScoreCutoffFilter.
file	ScoreEvaluator.cc [code]
file	ScoreEvaluator.hh [code]
file	ScoreTypeFilter.cc [code]
file	ScoreTypeFilter.fwd.hh [code]
file	ScoreTypeFilter.hh [code]
	definition of filter class ScoreTypeFilter.
file	ScoreTypeFilterCreator.hh [code]
	FilterCreators for the ScoreTypeFilter.
file	ShapeComplementarityFilter.cc [code]
file	ShapeComplementarityFilter.fwd.hh [code]
file	ShapeComplementarityFilter.hh [code]
	header file for ShapeComplementarityFilter class
file	ShapeComplementarityFilterCreator.hh [code]
	FilterCreator for the ShapeComplementarityFilter.
file	SheetFilter.cc [code]
	runs reject or accept filters on pose
file	SheetFilter.hh [code]
file	SidechainRmsdFilter.cc [code]
	A filter based on automorphic sidechain RMSD.
file	SidechainRmsdFilter.fwd.hh [code]
	A filter based on automorphic sidechain RMSD.
file	SidechainRmsdFilter.hh [code]
	A filter based on automorphic sidechain RMSD.
file	SidechainRmsdFilterCreator.hh [code]
file	SigmoidFilter.cc [code]
file	SigmoidFilter.fwd.hh [code]
file	SigmoidFilter.hh [code]
file	SigmoidFilterCreator.hh [code]
	FilterCreators for the SigmoidFilter.
file	SSElementMotifContactFilter.cc [code]
file	SSElementMotifContactFilter.fwd.hh [code]
	Filter for the interconnection between secondary elements.
file	SSElementMotifContactFilter.hh [code]
	Reports either the average ss-contact or the worst ss-contacting element.
file	SSElementMotifContactFilterCreator.hh [code]
file	SSMotifFinderFilter.cc [code]
file	SSMotifFinderFilter.fwd.hh [code]
file	SSMotifFinderFilter.hh [code]
file	SSMotifFinderFilterCreator.hh [code]
	FilterCreators for the SSMotifFinderFilter.
file	StemFinderFilter.cc [code]
file	StemFinderFilter.fwd.hh [code]
file	StemFinderFilter.hh [code]
file	StemFinderFilterCreator.hh [code]
	FilterCreators for the StemFinderFilter.
file	StructuralSimilarityEvaluator.cc [code]
file	StructuralSimilarityEvaluator.fwd.hh [code]
	forward declaration for StructuralSimilarityEvaluator class.
file	StructuralSimilarityEvaluator.hh [code]
file	StructureSimilarityEvaluatorCreator.cc [code]
file	StructureSimilarityEvaluatorCreator.hh [code]
	Header for StructureSimilarityEvaluatorCreator.
file	SymmetricMotifFilter.cc [code]
file	SymmetricMotifFilter.hh [code]
file	SymmetricMotifFilterCreator.hh [code]
file	TaskAwareSASAFilter.cc [code]
	Calculates SASA for a set of residues defined by TaskOperations.
file	TaskAwareSASAFilter.fwd.hh [code]
file	TaskAwareSASAFilter.hh [code]
	header file for TaskAwareSASAFilter class
file	TaskAwareSASAFilterCreator.hh [code]
	FilterCreator for the TaskAwareSASAFilter.
file	TaskAwareScoreTypeFilter.cc [code]
file	TaskAwareScoreTypeFilter.fwd.hh [code]
	forward declaration for TaskAwareScoreTypeFilter
file	TaskAwareScoreTypeFilter.hh [code]
file	TaskAwareScoreTypeFilterCreator.hh [code]
	FilterCreators for the TaskAwareScoreTypeFilter.
file	TerminusDistanceFilter.cc [code]
file	TerminusDistanceFilter.fwd.hh [code]
file	TerminusDistanceFilter.hh [code]
	definition of filter class TerminusDistanceFilter.
file	TerminusDistanceFilterCreator.hh [code]
	FilterCreators for the TerminusDistanceFilterCreator.
file	TotalSasaFilter.cc [code]
file	TotalSasaFilter.fwd.hh [code]
file	TotalSasaFilter.hh [code]
	definition of filter class TotalSasaFilter.
file	TotalSasaFilterCreator.hh [code]
	FilterCreators for the TotalSasaFilterCreator.