features Directory Reference

Directory dependency graph for features:

Directories
directory	helixAssembly
directory	strand_assembly

Files
file	AtomAtomPairFeatures.cc [code]
	report atom-atom pair geometry and scores to features statistics scientific benchmark
file	AtomAtomPairFeatures.fwd.hh [code]
	report atom-atom pair geometry and scores to features Statistics Scientific Benchmark
file	AtomAtomPairFeatures.hh [code]
	report atom-atom pair geometry and scores to features Statistics Scientific Benchmark
file	AtomAtomPairFeaturesCreator.cc [code]
file	AtomAtomPairFeaturesCreator.hh [code]
	Header for AtomAtomPairFeaturesCreator for the AtomAtomPairFeatures load-time factory registration scheme.
file	AtomInResidueAtomInResiduePairFeatures.cc [code]
	report atom-atom pair geometry and scores to features statistics scientific benchmark
file	AtomInResidueAtomInResiduePairFeatures.fwd.hh [code]
	report atom-atom pair geometry and scores to features Statistics Scientific Benchmark
file	AtomInResidueAtomInResiduePairFeatures.hh [code]
	report atom-atom pair geometry and scores to features Statistics Scientific Benchmark
file	AtomInResidueAtomInResiduePairFeaturesCreator.cc [code]
file	AtomInResidueAtomInResiduePairFeaturesCreator.hh [code]
	Header for AtomInResidueAtomInResiduePairFeaturesCreator for the AtomInResidueAtomInResiduePairFeatures load-time factory registration scheme.
file	AtomTypesFeatures.cc [code]
	report AtomType properties to features Statistics Scientific Benchmark
file	AtomTypesFeatures.fwd.hh [code]
	report AtomTypes geometry and scores to features Statistics Scientific Benchmark
file	AtomTypesFeatures.hh [code]
	report AtomType features Statistics Scientific Benchmark
file	AtomTypesFeaturesCreator.cc [code]
file	AtomTypesFeaturesCreator.hh [code]
	Header for AtomTypesFeaturesCreator for the AtomTypesFeatures load-time factory registration scheme.
file	BatchFeatures.cc [code]
file	BatchFeatures.fwd.hh [code]
file	BatchFeatures.hh [code]
file	BetaTurnDetection.cc [code]
	determine the presence and type of beta turn at a specific postion in a pose
file	BetaTurnDetection.fwd.hh [code]
	determine if there is a beta turn at particular postion
file	BetaTurnDetection.hh [code]
	determine the presence and type of beta turn at a specific postion in a pose
file	BetaTurnDetectionFeatures.cc [code]
	report beta turns to a DB
file	BetaTurnDetectionFeatures.fwd.hh [code]
	report residue level geometry and scores to features Statistics Scientific Benchmark
file	BetaTurnDetectionFeatures.hh [code]
file	BetaTurnDetectionFeaturesCreator.cc [code]
file	BetaTurnDetectionFeaturesCreator.hh [code]
	Header for BetaTurnDetectionFeaturesCreator for the BetaTurnDetectionFeatures load-time factory registration scheme.
file	ChargeChargeFeatures.cc [code]
	report geometric solvation energy for each polar site to a features database
file	ChargeChargeFeatures.fwd.hh [code]
	report geometric solvation for each polar site to features Statistics Scientific Benchmark
file	ChargeChargeFeatures.hh [code]
	report comments stored with each pose
file	ChargeChargeFeaturesCreator.cc [code]
file	ChargeChargeFeaturesCreator.hh [code]
	Header for ChargeChargeFeaturesCreator for the ChargeChargeFeatures load-time factory registration scheme.
file	DatabaseFilters.cc [code]
file	DatabaseFilters.fwd.hh [code]
	report data to database
file	DatabaseFilters.hh [code]
	report atom-atom pair geometry and scores to features Statistics Scientific Benchmark
file	DatabaseJobInputter.cc [code]
file	DatabaseJobInputter.fwd.hh [code]
file	DatabaseJobInputter.hh [code]
	header file for DatabaseJobInputter class
file	DatabaseJobInputterCreator.hh [code]
file	DatabaseJobOutputter.cc [code]
	Job Outputter to a database.
file	DatabaseJobOutputter.fwd.hh [code]
	header file for DatabaseJobOutputter class
file	DatabaseJobOutputter.hh [code]
	header file for DatabaseJobOutputter class
file	DatabaseJobOutputterCreator.hh [code]
file	DatabaseStatements.cc [code]
file	DatabaseStatements.hh [code]
file	DdGFeatures.cc [code]
	report the per-residue ddG score to the features database
file	DdGFeatures.fwd.hh [code]
	report the per-residue ddG score to the features database
file	DdGFeatures.hh [code]
	report the per-residue ddG score to the features database
file	DdGFeaturesCreator.cc [code]
file	DdGFeaturesCreator.hh [code]
	Header for DdGFeaturesCreator for the DdGFeatures load-time factory registration scheme.
file	FeaturesReporter.cc [code]
	Base class to report geometry and scores to features Statistics Scientific Benchmark.
file	FeaturesReporter.fwd.hh [code]
	report data to database
file	FeaturesReporter.hh [code]
	Base class to report geometry and scores to features Statistics Scientific Benchmark.
file	FeaturesReporterCreator.fwd.hh [code]
file	FeaturesReporterCreator.hh [code]
file	FeaturesReporterFactory.cc [code]
	Factory for creating FeaturesReporters objects.
file	FeaturesReporterFactory.fwd.hh [code]
	report data to database
file	FeaturesReporterFactory.hh [code]
	Factory for creating FeaturesReporter objects.
file	GeometricSolvationFeatures.cc [code]
	report geometric solvation energy for each polar site to a features database
file	GeometricSolvationFeatures.fwd.hh [code]
	report geometric solvation for each polar site to features Statistics Scientific Benchmark
file	GeometricSolvationFeatures.hh [code]
	report hydrogen bonding based solvation model to a features database
file	GeometricSolvationFeaturesCreator.cc [code]
file	GeometricSolvationFeaturesCreator.hh [code]
	Header for GeometricSolvationFeaturesCreator for the GeometricSolvationFeatures load-time factory registration scheme.
file	HBondFeatures.cc [code]
	report HBond geometry and scores to features Statistics Scientific Benchmark
file	HBondFeatures.fwd.hh [code]
	report HBond geometry and scores to features Statistics Scientific Benchmark
file	HBondFeatures.hh [code]
	report HBond geometry and scores to features Statistics Scientific Benchmark
file	HBondFeaturesCreator.cc [code]
file	HBondFeaturesCreator.hh [code]
	Header for HBondFeaturesCreator for the HBondFeatures load-time factory registration scheme.
file	HBondParameterFeatures.cc [code]
	report HBond Parameters to features Statistics Scientific Benchmark
file	HBondParameterFeatures.fwd.hh [code]
	report HBondParameter geometry and scores to features Statistics Scientific Benchmark
file	HBondParameterFeatures.hh [code]
	report HBond Parameter features Statistics Scientific Benchmark
file	HBondParameterFeaturesCreator.cc [code]
file	HBondParameterFeaturesCreator.hh [code]
	Header for HBondParameterFeaturesCreator for the HBondParameterFeatures load-time factory registration scheme.
file	HelixCapFeatures.cc [code]
file	HelixCapFeatures.fwd.hh [code]
file	HelixCapFeatures.hh [code]
file	HelixCapFeaturesCreator.cc [code]
file	HelixCapFeaturesCreator.hh [code]
file	InterfaceFeatures.cc [code]
file	InterfaceFeatures.fwd.hh [code]
file	InterfaceFeatures.hh [code]
	Analyzes interfaces and interface residues of a pose mainly using InterfaceAnalayzerMover.
file	InterfaceFeaturesCreator.cc [code]
file	InterfaceFeaturesCreator.hh [code]
file	JobDataFeatures.cc [code]
file	JobDataFeatures.fwd.hh [code]
file	JobDataFeatures.hh [code]
file	JobDataFeaturesCreator.cc [code]
file	JobDataFeaturesCreator.hh [code]
	Header for JobDataFeaturesCreator for the JobDataFeatures load-time factory registration scheme.
file	LoopAnchorFeatures.cc [code]
	report loop anchor features to a features database
file	LoopAnchorFeatures.fwd.hh [code]
	report residue level geometry and scores to features Statistics Scientific Benchmark
file	LoopAnchorFeatures.hh [code]
	report beta turns to a DB
file	LoopAnchorFeaturesCreator.cc [code]
file	LoopAnchorFeaturesCreator.hh [code]
	Header for LoopAnchorFeaturesCreator for the LoopAnchorFeatures load-time factory registration scheme.
file	ModelFeatures.cc [code]
file	ModelFeatures.fwd.hh [code]
file	ModelFeatures.hh [code]
file	ModelFeaturesCreator.cc [code]
file	ModelFeaturesCreator.hh [code]
file	OrbitalsFeatures.cc [code]
	report orbital geometry and scores to features statistics scientific benchmark
file	OrbitalsFeatures.fwd.hh [code]
	report Orbital geometry and scores to features Statistics Scientific Benchmark
file	OrbitalsFeatures.hh [code]
	report Orbital geometry and scores to features Statistics Scientific Benchmark
file	OrbitalsFeaturesCreator.cc [code]
file	OrbitalsFeaturesCreator.hh [code]
	Header for OrbitalsFeaturesCreator for the OrbitalsFeatures load-time factory registration scheme.
file	PairFeatures.cc [code]
	report orbital geometry and scores to features statistics scientific benchmark
file	PairFeatures.fwd.hh [code]
	report atom-atom pair geometry and scores to features Statistics Scientific Benchmark
file	PairFeatures.hh [code]
	report residue and atom pair geometry and scores to features Statistics Scientific Benchmark
file	PairFeaturesCreator.cc [code]
file	PairFeaturesCreator.hh [code]
	Header for PairFeaturesCreator for the PairFeatures load-time factory registration scheme.
file	PdbDataFeatures.cc [code]
file	PdbDataFeatures.fwd.hh [code]
file	PdbDataFeatures.hh [code]
file	PdbDataFeaturesCreator.cc [code]
file	PdbDataFeaturesCreator.hh [code]
	Header for PdbDataFeaturesCreator for the PdbDataFeatures load-time factory registration scheme.
file	PoseCommentsFeatures.cc [code]
	report comments stored with each pose
file	PoseCommentsFeatures.fwd.hh [code]
	report residue level geometry and scores to features Statistics Scientific Benchmark
file	PoseCommentsFeatures.hh [code]
	report comments stored with each pose
file	PoseCommentsFeaturesCreator.cc [code]
file	PoseCommentsFeaturesCreator.hh [code]
	Header for PoseCommentsFeaturesCreator for the PoseCommentsFeatures load-time factory registration scheme.
file	PoseConformationFeatures.cc [code]
	report comments stored with each pose
file	PoseConformationFeatures.fwd.hh [code]
	report pose fold tree related features
file	PoseConformationFeatures.hh [code]
	report comments stored with each pose
file	PoseConformationFeaturesCreator.cc [code]
file	PoseConformationFeaturesCreator.hh [code]
	Header for PoseConformationFeaturesCreator for the PoseConformationFeatures load-time factory registration scheme.
file	ProteinBackboneAtomAtomPairFeatures.cc [code]
	report atom-atom pair distances between atoms in protein backbones to features Statistics Scientific Benchmark
file	ProteinBackboneAtomAtomPairFeatures.fwd.hh [code]
	report atom-atom pair distances between atoms in protein backbones to features Statistics Scientific Benchmark
file	ProteinBackboneAtomAtomPairFeatures.hh [code]
	report atom-atom pair distances between atoms in protein backbones to features Statistics Scientific Benchmark
file	ProteinBackboneAtomAtomPairFeaturesCreator.cc [code]
file	ProteinBackboneAtomAtomPairFeaturesCreator.hh [code]
	Header for ProteinBackboneAtomAtomPairFeaturesCreator for the ProteinBackboneAtomAtomPairFeatures load-time factory registration scheme.
file	ProteinBackboneTorsionAngleFeatures.cc [code]
	report Backbone Torsional Angle features
file	ProteinBackboneTorsionAngleFeatures.fwd.hh [code]
	report protein backbone torsion angle features
file	ProteinBackboneTorsionAngleFeatures.hh [code]
	report protein backbone torsion angle features
file	ProteinBackboneTorsionAngleFeaturesCreator.cc [code]
file	ProteinBackboneTorsionAngleFeaturesCreator.hh [code]
	Header for ProteinBackboneTorsionAngleFeaturesCreator for the ProteinBackboneTorsionAngleFeatures load-time factory registration scheme.
file	ProteinBondGeometryFeatures.cc [code]
	report Backbone Torsional Angle features
file	ProteinBondGeometryFeatures.fwd.hh [code]
	report protein bond geometry features
file	ProteinBondGeometryFeatures.hh [code]
	report protein backbone torsion angle features
file	ProteinBondGeometryFeaturesCreator.cc [code]
file	ProteinBondGeometryFeaturesCreator.hh [code]
	Header for ProteinBondGeometryFeaturesCreator for the ProteinBondGeometryFeatures load-time factory registration scheme.
file	ProteinResidueConformationFeatures.cc [code]
	report idealized torsional DOFs Statistics Scientific Benchmark
file	ProteinResidueConformationFeatures.fwd.hh [code]
	report residue level geometry and scores to features Statistics Scientific Benchmark
file	ProteinResidueConformationFeatures.hh [code]
	report idealized torsional DOFs Statistics Scientific Benchmark
file	ProteinResidueConformationFeaturesCreator.cc [code]
file	ProteinResidueConformationFeaturesCreator.hh [code]
	Header for ProteinResidueConformationFeaturesCreator for the ProteinResidueConformationFeatures load-time factory registration scheme.
file	ProteinRMSDFeatures.cc [code]
	report the root mean squared deviation between two poses
file	ProteinRMSDFeatures.fwd.hh [code]
	report RMSD similarity of a protein structure against supplied reference structure
file	ProteinRMSDFeatures.hh [code]
	report ProteinRMSD similarity of structure against supplied reference structure
file	ProteinRMSDFeaturesCreator.cc [code]
file	ProteinRMSDFeaturesCreator.hh [code]
	Header for ProteinRMSDFeaturesCreator for the ProteinRMSDFeatures load-time factory registration scheme.
file	ProteinRMSDNoSuperpositionFeatures.cc [code]
	report the root mean squared deviation (without superposition) between two poses
file	ProteinRMSDNoSuperpositionFeatures.fwd.hh [code]
	report (no superposition) RMSD similarity of a protein structure against supplied reference structure
file	ProteinRMSDNoSuperpositionFeatures.hh [code]
	report ProteinRMSD similarity of structure against supplied reference structure without superposition
file	ProteinRMSDNoSuperpositionFeaturesCreator.cc [code]
file	ProteinRMSDNoSuperpositionFeaturesCreator.hh [code]
	Header for ProteinRMSDNoSuperpositionFeaturesCreator for the ProteinRMSDNoSuperpositionFeatures load-time factory registration scheme.
file	ProteinSilentReport.cc [code]
file	ProteinSilentReport.fwd.hh [code]
	report pose fold tree related features
file	ProteinSilentReport.hh [code]
	report feature data to database
file	ProtocolFeatures.cc [code]
	report protocol level features to features statistics scientific benchmark
file	ProtocolFeatures.fwd.hh [code]
	report Orbital geometry and scores to features Statistics Scientific Benchmark
file	ProtocolFeatures.hh [code]
	report Orbital geometry and scores to features Statistics Scientific Benchmark
file	RadiusOfGyrationFeatures.cc [code]
	report the radius of gyration to features Statistics Scientific Benchmark
file	RadiusOfGyrationFeatures.fwd.hh [code]
	report the radius of gyration to features Statistics Scientific Benchmark
file	RadiusOfGyrationFeatures.hh [code]
	report the radius of gyration to features Statistics Scientific Benchmark
file	RadiusOfGyrationFeaturesCreator.cc [code]
file	RadiusOfGyrationFeaturesCreator.hh [code]
	Header for RadiusOfGyrationFeaturesCreator for the RadiusOfGyrationFeatures load-time factory registration scheme.
file	Report.cc [code]
file	Report.fwd.hh [code]
	report pose fold tree related features
file	Report.hh [code]
	report feature data to database
file	ReportToDB.cc [code]
	report all data to a database
file	ReportToDB.fwd.hh [code]
	report data to sqlite database
file	ReportToDB.hh [code]
	report feature data to sqlite database
file	ReportToDBCreator.hh [code]
	This class will create instances of Mover ReportToDB for the MoverFactory.
file	ResidueBurialFeatures.cc [code]
	report residue burial to features statistics scientific benchmark
file	ResidueBurialFeatures.fwd.hh [code]
	report residue level geometry and scores to features Statistics Scientific Benchmark
file	ResidueBurialFeatures.hh [code]
	report residue to features Statistics Scientific Benchmark
file	ResidueBurialFeaturesCreator.cc [code]
file	ResidueBurialFeaturesCreator.hh [code]
	Header for ResidueBurialFeaturesCreator for the ResidueBurialFeatures load-time factory registration scheme.
file	ResidueConformationFeatures.cc [code]
	report idealized torsional DOFs Statistics Scientific Benchmark
file	ResidueConformationFeatures.fwd.hh [code]
	report residue level geometry and scores to features Statistics Scientific Benchmark
file	ResidueConformationFeatures.hh [code]
file	ResidueConformationFeaturesCreator.cc [code]
file	ResidueConformationFeaturesCreator.hh [code]
	Header for ResidueConformationFeaturesCreator for the ResidueConformationFeatures load-time factory registration scheme.
file	ResidueFeatures.cc [code]
	report residue features to features Statistics Scientific Benchmark
file	ResidueFeatures.fwd.hh [code]
	report residue features to features Statistics Scientific Benchmark
file	ResidueFeatures.hh [code]
	report residue to features Statistics Scientific Benchmark
file	ResidueFeaturesCreator.cc [code]
file	ResidueFeaturesCreator.hh [code]
	Header for ResidueFeaturesCreator for the ResidueFeatures load-time factory registration scheme.
file	ResidueGridScoresFeatures.cc [code]
	detailed per atom scores of Scoring Grids
file	ResidueGridScoresFeatures.fwd.hh [code]
file	ResidueGridScoresFeatures.hh [code]
file	ResidueGridScoresFeaturesCreator.hh [code]
file	ResidueScoresFeatures.cc [code]
	report residue scores to features Statistics Scientific Benchmark
file	ResidueScoresFeatures.fwd.hh [code]
	report residue scores to features Statistics Scientific Benchmark
file	ResidueScoresFeatures.hh [code]
	report residue scores to features Statistics Scientific Benchmark
file	ResidueScoresFeaturesCreator.cc [code]
file	ResidueScoresFeaturesCreator.hh [code]
	Header for ResidueScoresFeaturesCreator for the ResidueScoresFeatures load-time factory registration scheme.
file	ResidueSecondaryStructureFeatures.cc [code]
	report ResidueSecondaryStructure geometry and scores to features Statistics Scientific Benchmark
file	ResidueSecondaryStructureFeatures.fwd.hh [code]
	report ResidueSecondaryStructure geometry and scores to features Statistics Scientific Benchmark
file	ResidueSecondaryStructureFeatures.hh [code]
	report ResidueSecondaryStructure geometry and scores to features Statistics Scientific Benchmark
file	ResidueSecondaryStructureFeaturesCreator.cc [code]
file	ResidueSecondaryStructureFeaturesCreator.hh [code]
	Header for ResidueSecondaryStructureFeaturesCreator for the ResidueSecondaryStructureFeatures load-time factory registration scheme.
file	ResidueTotalScoresFeatures.cc [code]
	report the total per residue score to a features database
file	ResidueTotalScoresFeatures.fwd.hh [code]
	report the total per residue score to a features database
file	ResidueTotalScoresFeatures.hh [code]
	report the total per residue score to a features database
file	ResidueTotalScoresFeaturesCreator.cc [code]
file	ResidueTotalScoresFeaturesCreator.hh [code]
	Header for ResidueTotalScoresFeaturesCreator for the ResidueTotalScoresFeatures load-time factory registration scheme.
file	ResidueTypesFeatures.cc [code]
	report ResidueTypes to features Statistics Scientific Benchmark
file	ResidueTypesFeatures.fwd.hh [code]
	report ResidueTypes geometry and scores to features Statistics Scientific Benchmark
file	ResidueTypesFeatures.hh [code]
	report ResidueTypes features Statistics Scientific Benchmark
file	ResidueTypesFeaturesCreator.cc [code]
file	ResidueTypesFeaturesCreator.hh [code]
	Header for ResidueTypesFeaturesCreator for the ResidueTypesFeatures load-time factory registration scheme.
file	RotamerBoltzmannWeightFeatures.cc [code]
	report residue burial to features statistics scientific benchmark
file	RotamerBoltzmannWeightFeatures.fwd.hh [code]
	report rotamer boltzmann weights to features Statistics Scientific Benchmark
file	RotamerBoltzmannWeightFeatures.hh [code]
	report rotamer boltzmann weights to features Statistics Scientific Benchmark
file	RotamerBoltzmannWeightFeaturesCreator.cc [code]
file	RotamerBoltzmannWeightFeaturesCreator.hh [code]
	Header for RotamerBoltzmannWeightFeaturesCreator for the RotamerBoltzmannWeightFeatures load-time factory registration scheme.
file	RotamerFeatures.cc [code]
	report rotamer library features to the database
file	RotamerFeatures.fwd.hh [code]
	report residue level geometry and scores to features Statistics Scientific Benchmark
file	RotamerFeatures.hh [code]
	report idealized torsional DOFs Statistics Scientific Benchmark
file	RotamerFeaturesCreator.cc [code]
file	RotamerFeaturesCreator.hh [code]
	Header for RotamerFeaturesCreator for the RotamerFeatures load-time factory registration scheme.
file	RotamerRecoveryFeatures.cc [code]
	report rotamer recover features and scores to features Statistics Scientific Benchmark
file	RotamerRecoveryFeatures.fwd.hh [code]
	report Rotamer Recovery features to features Statistics Scientific Benchmark
file	RotamerRecoveryFeatures.hh [code]
	report Rotamer Recovery Statistics Scientific Benchmark
file	RotamerRecoveryFeaturesCreator.cc [code]
file	RotamerRecoveryFeaturesCreator.hh [code]
	Header for RotamerRecoveryFeaturesCreator for the RotamerRecoveryFeatures load-time factory registration scheme.
file	RuntimeFeatures.cc [code]
file	RuntimeFeatures.fwd.hh [code]
file	RuntimeFeatures.hh [code]
file	RuntimeFeaturesCreator.hh [code]
file	SaltBridgeFeatures.cc [code]
	report geometric solvation energy for each polar site to a features database
file	SaltBridgeFeatures.fwd.hh [code]
	report geometric solvation for each polar site to features Statistics Scientific Benchmark
file	SaltBridgeFeatures.hh [code]
	report comments stored with each pose
file	SaltBridgeFeaturesCreator.cc [code]
file	SaltBridgeFeaturesCreator.hh [code]
	Header for SaltBridgeFeaturesCreator for the SaltBridgeFeatures load-time factory registration scheme.
file	ScoreFunctionFeatures.cc [code]
	report the score parameters to a features database
file	ScoreFunctionFeatures.fwd.hh [code]
	Structure scores to features Statistics Scientific Benchmark.
file	ScoreFunctionFeatures.hh [code]
	Add score function parameters to a features database.
file	ScoreFunctionFeaturesCreator.cc [code]
file	ScoreFunctionFeaturesCreator.hh [code]
	Header for ScoreFunctionFeaturesCreator for the ScoreFunctionFeatures load-time factory registration scheme.
file	ScoreTypeFeatures.cc [code]
	report protocol level features to features statistics scientific benchmark
file	ScoreTypeFeatures.fwd.hh [code]
	Structure scores to features Statistics Scientific Benchmark.
file	ScoreTypeFeatures.hh [code]
	Structure scores to features Statistics Scientific Benchmark.
file	ScoreTypeFeaturesCreator.cc [code]
file	ScoreTypeFeaturesCreator.hh [code]
	Header for ScoreTypeFeaturesCreator for the ScoreTypeFeatures load-time factory registration scheme.
file	ScreeningFeatures.cc [code]
	report JSON object with information needed for vHTS postprocessing
file	ScreeningFeatures.fwd.hh [code]
	forward headers for ScreeningFeatuers
file	ScreeningFeatures.hh [code]
	report JSON object with information needed for vHTS postprocessing.
file	ScreeningFeaturesCreator.cc [code]
file	ScreeningFeaturesCreator.hh [code]
file	SecondaryStructureSegmentFeatures.cc [code]
file	SecondaryStructureSegmentFeatures.fwd.hh [code]
file	SecondaryStructureSegmentFeatures.hh [code]
file	SecondaryStructureSegmentFeaturesCreator.cc [code]
file	SecondaryStructureSegmentFeaturesCreator.hh [code]
file	SmotifFeatures.cc [code]
	Calculate 4 geometric values used to classify smotifs. Reference (http://www.ncbi.nlm.nih.gov/pubmed/20421995)
file	SmotifFeatures.fwd.hh [code]
file	SmotifFeatures.hh [code]
file	SmotifFeaturesCreator.cc [code]
file	SmotifFeaturesCreator.hh [code]
file	StructureFeatures.cc [code]
file	StructureFeatures.fwd.hh [code]
	report structure features to features Statistics Scientific Benchmark
file	StructureFeatures.hh [code]
	report structure identifiers to a features database
file	StructureFeaturesCreator.cc [code]
file	StructureFeaturesCreator.hh [code]
	Header for StructureFeaturesCreator for the StructureFeatures load-time factory registration scheme.
file	StructureScoresFeatures.cc [code]
	report structure score features to a features database
file	StructureScoresFeatures.fwd.hh [code]
	Structure scores to features Statistics Scientific Benchmark.
file	StructureScoresFeatures.hh [code]
	Structure scores to features Statistics Scientific Benchmark.
file	StructureScoresFeaturesCreator.cc [code]
file	StructureScoresFeaturesCreator.hh [code]
	Header for StructureScoresFeaturesCreator for the StructureScoresFeatures load-time factory registration scheme.
file	TaskOperationFeatures.cc [code]
	report
file	TaskOperationFeatures.fwd.hh [code]
	report
file	TaskOperationFeatures.hh [code]
	report
file	TaskOperationFeaturesCreator.cc [code]
file	TaskOperationFeaturesCreator.hh [code]
	Header.
file	TotalScoreFeatures.cc [code]
file	TotalScoreFeatures.fwd.hh [code]
file	TotalScoreFeatures.hh [code]
file	TotalScoreFeaturesCreator.hh [code]
file	TrajectoryMapFeatures.cc [code]
	Map trajectory structure_ids to cycle number.
file	TrajectoryMapFeatures.fwd.hh [code]
	Map trajectory structure_ids to cycle number.
file	TrajectoryMapFeatures.hh [code]
	Map trajectory structure_ids to cycle number.
file	TrajectoryMapFeaturesCreator.cc [code]
file	TrajectoryMapFeaturesCreator.hh [code]
	Header for TrajectoryMapFeaturesCreator for the TrajectoryMapFeatures load-time factory registration scheme.
file	TrajectoryReportToDB.cc [code]
	Report features data to database multiple times per structure, creating a trajectory.
file	TrajectoryReportToDB.fwd.hh [code]
	Report features data to database multiple times per structure, creating a trajectory.
file	TrajectoryReportToDB.hh [code]
	Report features data to database multiple times per structure, creating a trajectory.
file	TrajectoryReportToDBCreator.hh [code]
	This class will create instances of Mover TrajectoryReportToDB for the MoverFactory.
file	UnrecognizedAtomFeatures.cc [code]
	report unrecognized atoms features to features Statistics Scientific Benchmark
file	UnrecognizedAtomFeatures.fwd.hh [code]
	report residue features to features Statistics Scientific Benchmark
file	UnrecognizedAtomFeatures.hh [code]
	report residue to features Statistics Scientific Benchmark
file	UnrecognizedAtomFeaturesCreator.cc [code]
file	UnrecognizedAtomFeaturesCreator.hh [code]
	Header for UnrecognizedAtomFeaturesCreator for the UnrecognizedAtomFeatures load-time factory registration scheme.
file	util.cc [code]
file	util.hh [code]
file	WaterFeatures.cc [code]
file	WaterFeatures.fwd.hh [code]
file	WaterFeatures.hh [code]
	report geometry between water and hbond sites
file	WaterFeaturesCreator.cc [code]
file	WaterFeaturesCreator.hh [code]
	Header for WaterFeaturesCreator for the WaterFeatures load-time factory registration scheme.