- m -

maca : core::scoring::rna::chemical_shift
MAKE_ROT_LIB : protocols::jd2::JobInputterInputSource
maqw : core::scoring::rna::chemical_shift
maqx : core::scoring::rna::chemical_shift
maqy : core::scoring::rna::chemical_shift
maqz : core::scoring::rna::chemical_shift
Martin : protocols::antibody
marx : core::scoring::rna::chemical_shift
mary : core::scoring::rna::chemical_shift
marz : core::scoring::rna::chemical_shift
MASTER : core::io::pdb
MATCH_AA : core::scoring::motif
MATCH_ALL : protocols::farna::fragments
MATCH_ANY : core::scoring::motif
MATCH_EXACT : protocols::farna::fragments
MATCH_HYDROPHOBICITY : core::scoring::motif
MATCH_ROTAMER : core::scoring::motif
MATCH_YR : protocols::farna::fragments
MAX : protocols::simple_filters
MAX_TYPE : protocols::noesy_assign
MC_ONE_TORSION : protocols::stepwise::sampler
MCA_accepted_score_beat_last : protocols::moves
MCA_accepted_score_beat_low : protocols::moves
MCA_accepted_thermally : protocols::moves
MCA_rejected : protocols::moves
Mcbeta : core::scoring
Md : core::chemical::element
MDLTYP : core::io::pdb
MEMBRANE : core::chemical
Menv : core::scoring
Menv_non_helix : core::scoring
Menv_smooth : core::scoring
Menv_termini : core::scoring
Menv_tm_proj : core::scoring
METAL : core::chemical
METALBINDING : core::chemical
metalbinding_constraint : core::scoring
metalhash_constraint : core::scoring
METHYL : protocols::noesy_assign
METHYL_GLYCOSIDE : core::chemical
METHYLATED_CTERMINUS : core::chemical
METHYLATED_CTERMINUS_VARIANT : core::chemical
METHYLATED_NTERM_VARIANT : core::chemical
METHYLATION : core::chemical
Mg : core::chemical::element
mg : core::scoring
mg_lig : core::scoring
mg_pair_nblist : core::scoring
mg_ref : core::scoring
mg_sol : core::scoring
MIN : protocols::simple_filters
minima : protocols::simple_moves::bb_sampler
minimize : protocols::antibody::design
minimize_cartesian : protocols::antibody::design
MinTypeEnum_total : protocols::antibody::design
missing_res : core::scoring
Mlipo : core::scoring
mm_bend : core::scoring
mm_lj_energy_inter_method : core::scoring::methods
mm_lj_inter_atr : core::scoring
MM_LJ_INTER_NBLIST : core::scoring::EnergiesCacheableDataType
mm_lj_inter_rep : core::scoring
mm_lj_intra_atr : core::scoring
mm_lj_intra_atr_ref : core::scoring
MM_LJ_INTRA_NBLIST : core::scoring::EnergiesCacheableDataType
mm_lj_intra_nblist : core::scoring
mm_lj_intra_rep : core::scoring
mm_lj_intra_rep_ref : core::scoring
MM_LJ_TRIE_COLLECTION : core::scoring::EnergiesCacheableDataType
mm_stretch : core::scoring
mm_twist : core::scoring
mm_twist_ref : core::scoring
Mn : core::chemical::element
Mo : core::chemical::element
MODEL : core::io::pdb
MODIFY_WAS_SUCCESSFUL : protocols::forge::build::BuildInstructionState
MODRES : core::io::pdb
MONOCLINIC : protocols::cryst
mp_res_data : core::scoring
mp_respair_data : core::scoring
Mpair : core::scoring
MPCbeta : core::scoring
MPEnv : core::scoring
MPLipo : core::scoring
MPNonHelix : core::scoring
MPPair : core::scoring
MPTermini : core::scoring
MPTMProj : core::scoring
mrb_do_not_merge : core::chemical
mrb_merge_w_next : core::chemical
mrb_merge_w_prev : core::chemical
MS_FAIL : protocols::moves
MS_FAIL_BAD_INPUT : protocols::moves
MS_FAIL_DO_NOT_RETRY : protocols::moves
MS_FAIL_RETRY : protocols::moves
MS_SUCCESS : protocols::moves
Mt : core::chemical::element
MTRIX1 : core::io::pdb
MTRIX2 : core::io::pdb
MTRIX3 : core::io::pdb
MU_ATOM : core::chemical
multipole_elec : core::scoring
multipole_elec_lr : core::scoring::methods
MULTIPOLE_ELEC_ROTAMER_SET_INFO : core::conformation::RotamerSetCacheableDataType
MUST_CONTROL : protocols::environment::claims