Rosetta
2017.26
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- _ -
__ANTIBODY_GRAFTING__ :
util.hh
_MATRIX_MODE_LIMIT_ :
Clustering.cc
_OVER_RMSD_ :
Clustering.cc
,
AdjacentList.cc
_SHOW_PERCENTAGE_COMPLETE_ :
Clustering.cc
_TEST_JACOBI_ :
jacobi.cc
- a -
ABEGO_COUNT :
P_AA_ABEGO3.cc
ABS :
ShapeComplementarityCalculator_Private.hh
- b -
BOINC_CHECKPOINT_COUNT_FILE :
boinc.hh
BOINC_DEFAULT_MAX_CPU_RUN_TIME :
boinc.hh
BOINC_INIT_COUNT_FILE :
boinc.hh
BOINC_MAX_GFX_CPU :
boinc.hh
BOINC_MAX_GFX_FPS :
boinc.hh
BOINC_MAX_NO_PROGRESS_INIT_CNT :
boinc.hh
BOINC_MAX_NSTRUCT :
boinc.hh
BRIDGE_RES :
StepWiseWorkingParameters.hh
- c -
C5I_C5I_PLUS_ONE_MAX_DIST :
StepWiseRNA_Classes.hh
CAP_FA_REP :
NestedEnergyTermOptEData.cc
,
OptEData.cc
cubic_roots :
cubic.cc
,
cubic.hh
CUTOFF :
CartesianBondedEnergy.cc
CYS_1oSIN_CB_SG_HG :
FunGroupTK.cc
CYS_CB_HG_DIS :
FunGroupTK.cc
CYS_CB_SG_PERP :
FunGroupTK.cc
CYS_HG_SG_PRJLEN :
FunGroupTK.cc
CYS_HG_SG_X_DROP :
FunGroupTK.cc
CYS_SG_CB_H :
FunGroupTK.cc
- d -
DEFAULT_DIST_CUTOFF_MULTIPLIER :
metalloproteins_util.hh
DEFAULT_PERCENTILE_FOR_THRESHOLD :
Clustering.cc
DEFINE_OPTIONS_NOW :
PeakAssignmentParameters.cc
DEG2RAD :
refinable_lattice.cc
,
spacegroup.cc
,
util.hh
DIM :
superimpose.cc
,
PCA.cc
DIM6 :
superimpose.cc
,
PCA.cc
,
superimpose.cc
DIST_TH :
SuckerEnergy.cc
,
GaussianOverlapEnergy.cc
- f -
foreach :
util.cc
,
EnergiesByTaskCalculator.cc
,
RB_geometry.cc
foreach_ :
ResidueArrayAnnealingEvaluator.cc
,
LocalRelax.cc
FOREACH_Chi_BB :
SingleResidueDunbrackLibrary.cc
- g -
GAP_SIZE_DUMMY :
StepWiseBasicWorkingParameters.hh
GetCurrentDir :
StepWiseRNA_PoseSetupFromCommandLine.cc
getmax :
TMalign.cc
getmin :
TMalign.cc
- h -
HIS_1oSIN_CA_CB_CG :
FunGroupTK.cc
HIS_CB_CG_PERP :
FunGroupTK.cc
HIS_CB_HG_DIS :
FunGroupTK.cc
HIS_CB_HG_PAR :
FunGroupTK.cc
HIS_CG_CB_H :
FunGroupTK.cc
HIS_HE2_CG_PRJLEN :
FunGroupTK.cc
HIS_HE2_CG_X_DROP :
FunGroupTK.cc
- i -
IDEAL_PHOS :
ErraserMinimizerMover.cc
INCLUDE_core_scoring_MembranePotential_cc :
MembranePotential.cc
INCLUDED_core_pack_packer_trie_trie_vs_trie_HH :
trie_vs_path.cc
INCLUDED_core_pose_stream_util_HH :
util.cc
INCLUDED_core_scoring_membrane_FaMPEnvEnergy_cc :
FaMPEnvEnergy.cc
INCLUDED_core_scoring_membrane_FaMPSolvEnergy_cc :
FaMPSolvEnergy.cc
INCLUDED_core_scoring_membrane_MembraneData_cc :
MembraneData.cc
INCLUDED_core_scoring_membrane_MPCbetaEnergy_cc :
MPCBetaEnergy.cc
INCLUDED_core_scoring_membrane_MPEnvEnergy_cc :
MPEnvEnergy.cc
INCLUDED_core_scoring_membrane_MPLipoEnergy_cc :
MPLipoEnergy.cc
INCLUDED_core_scoring_membrane_MPNonHelixPenalty_cc :
MPNonHelixPenalty.cc
INCLUDED_core_scoring_membrane_MPPairEnergy_cc :
MPPairEnergy.cc
INCLUDED_core_scoring_membrane_MPTerminiPenalty_cc :
MPTerminiPenalty.cc
INCLUDED_core_scoring_membrane_MPTMProjPenalty_cc :
MPTMProjPenalty.cc
INCLUDED_core_scoring_sc_MolecularSurfaceCalculator_cc :
MolecularSurfaceCalculator.cc
INCLUDED_core_scoring_sc_ShapeComplementarityCalculator_cc :
ShapeComplementarityCalculator.cc
INCLUDED_protocols_docking_membrane_MPDockingMover_cc :
MPDockingMover.cc
INCLUDED_protocols_docking_membrane_MPDockingSetupMover_cc :
MPDockingSetupMover.cc
INCLUDED_protocols_docking_membrane_MPFindInterfaceMover_cc :
MPFindInterfaceMover.cc
INCLUDED_protocols_docking_membrane_QuickRelaxPartnersSeparately_cc :
QuickRelaxPartnersSeparately.cc
INCLUDED_protocols_features_InterfaceDdGMoverCreator_cc :
InterfaceDdGMoverCreator.cc
INCLUDED_protocols_membrane_AddMembraneMover_cc :
AddMembraneMover.cc
INCLUDED_protocols_membrane_FlipMover_cc :
FlipMover.cc
INCLUDED_protocols_membrane_MembranePositionFromTopologyMover_cc :
MembranePositionFromTopologyMover.cc
INCLUDED_protocols_membrane_MPLipidAccessibility_cc :
MPLipidAccessibility.cc
INCLUDED_protocols_membrane_MPMutateRelaxMover_cc :
MPMutateRelaxMover.cc
INCLUDED_protocols_membrane_MPQuickRelaxMover_cc :
MPQuickRelaxMover.cc
INCLUDED_protocols_membrane_OptimizeMembranePositionMover_cc :
OptimizeMembranePositionMover.cc
INCLUDED_protocols_membrane_OptimizeProteinEmbeddingMover_cc :
OptimizeProteinEmbeddingMover.cc
INCLUDED_protocols_membrane_SpinAroundPartnerMover_cc :
SpinAroundPartnerMover.cc
INCLUDED_protocols_membrane_symmetry_SymmetricAddMembraneMover_cc :
SymmetricAddMembraneMover.cc
INCLUDED_protocols_membrane_TiltMover_cc :
TiltMover.cc
INCLUDED_protocols_membrane_TransformIntoMembraneMover_cc :
TransformIntoMembraneMover.cc
INCLUDED_protocols_membrane_TranslationRotationMover_cc :
TranslationRotationMover.cc
INCLUDED_protocols_membrane_visualize_VisualizeEmbeddingMover_cc :
VisualizeEmbeddingMover.cc
INCLUDED_protocols_membrane_visualize_VisualizeMembraneMover_cc :
VisualizeMembraneMover.cc
INCLUDED_protocols_moves_PyMOLMover_CC :
PyMOLMover.cc
INCLUDED_protocols_pose_reporters_BasicPoseReporters_CC :
BasicPosePropertyReporters.cc
INCLUDED_protocols_pose_selectors_BasicPoseSelectors_cc :
BasicPoseSelectors.cc
INCLUDED_protocols_pose_selectors_ClusterPoseSelector_cc :
ClusterPoseSelector.cc
INCLUDED_protocols_relax_membrane_MPRangeRelaxMover_cc :
MPRangeRelaxMover.cc
INCLUDED_protocols_relax_RangeRelaxMover_cc :
RangeRelaxMover.cc
INCLUDED_protocols_rosetta_scripts_PosePropertyReporter_CC :
PosePropertyReporter.cc
INCLUDED_protocols_rosetta_scripts_PoseSelector_CC :
PoseSelector.cc
INIT :
SingleResidueDunbrackLibrary.cc
- k -
KEY_COUNT :
P_AA_ABEGO3.cc
- l -
LONGEST_CHAIN :
pdb_util.cc
,
SimPDB.hh
,
PreloadedPDB.hh
,
pdb_util.hh
- m -
Math_PI :
FACTSResidue.cc
MAX :
ShapeComplementarityCalculator_Private.hh
,
ANN.cc
MAX_MOTIF_D2 :
MotifHashRigidScore.cc
MAX_PERCENTILE_FOR_THRESHOLD :
Clustering.cc
MAX_SUBDIV :
ShapeComplementarityCalculator_Private.hh
MAX_UINT16 :
read_biounit.cc
,
motif_hash_stuff.cc
,
util.cc
,
xfrags.cc
MAX_UINT8 :
util.cc
,
xfrags.cc
,
motif_hash_stuff.cc
,
read_biounit.cc
MIN :
ShapeComplementarityCalculator_Private.hh
,
ANN.cc
MIN_PERCENTILE_FOR_THRESHOLD :
Clustering.cc
MOVING_RES :
StepWiseWorkingParameters.hh
MPI_ANY_SOURCE :
MPI_WorkUnitManager.hh
,
MPI_WorkUnitManager_Slave.hh
- n -
NLS :
ResidualDipolarCoupling.cc
NLSDA :
ResidualDipolarCoupling.cc
NLSDAR :
ResidualDipolarCoupling.cc
NLSR :
ResidualDipolarCoupling.cc
NO_LOOP_SIZE_CST :
util.cc
NUM_ITER :
jacobi.cc
NUM_TRIALS_FOR_THRESHOLD :
Clustering.cc
- o -
O3I_C5I_MAX_DIST :
StepWiseRNA_Classes.hh
O3I_C5I_MIN_DIST :
StepWiseRNA_Classes.hh
O3I_C5I_PLUS_ONE_MAX_DIST :
StepWiseRNA_Classes.hh
O3I_C5I_PLUS_TWO_MAX_DIST :
StepWiseRNA_Classes.hh
O3I_O3I_PLUS_ONE_MAX_DIST :
StepWiseRNA_Classes.hh
OBSOLETE :
EvaluatedArchive.cc
,
IterativeBase.cc
opt_read_out_macro :
PeakAssignmentParameters.cc
opt_read_out_macro2 :
PeakAssignmentParameters.cc
- p -
PI :
ShapeComplementarityCalculator_Private.hh
,
cubic.cc
,
cubic.hh
PROCESS_STACK_SIZE :
init.cc
- r -
RAD2DEG :
refinable_lattice.cc
,
spacegroup.cc
,
util.hh
RANDOM_DECOY_SIZE_FOR_FILTERING :
Clustering.cc
RANDOM_DECOY_SIZE_FOR_THRESHOLD :
Clustering.cc
REFERENCE_SIZE :
Clustering.cc
ROTATE :
superimpose.cc
,
jacobi.cc
,
ResidualDipolarCoupling.cc
,
PCA.cc
- s -
SALT :
Chunk.cc
SD_MULTIPLIER :
Chunk.cc
SimpleCycpepPredictApplication_DISULFBOND_ANGLE :
SimpleCycpepPredictApplication.hh
SimpleCycpepPredictApplication_DISULFBOND_LENGTH :
SimpleCycpepPredictApplication.hh
SimpleCycpepPredictApplication_PEPBOND_C_ANGLE :
SimpleCycpepPredictApplication.hh
SimpleCycpepPredictApplication_PEPBOND_LENGTH :
SimpleCycpepPredictApplication.hh
SimpleCycpepPredictApplication_PEPBOND_N_ANGLE :
SimpleCycpepPredictApplication.hh
SMALL_NUM_ITER :
jacobi.cc
SPARTA_MAX_NUM :
constants.hh
SPARTA_MAXNUM :
constants.hh
SQRT_2PI :
USOGFunc.cc
STANDARD_CENTROID_BIN_SIZE :
util.hh
STANDARD_EULER_ANGLE_BIN_SIZE :
util.hh
STANDARD_EULER_Z_BIN_SIZE :
util.hh
- t -
TAG_NUM_FORMAT_LENGTH :
JobDistributors.hh
THROW_EXCEPTION :
serialize_pose.cc
TRDEBUG :
MPI_WorkUnitManager.cc
,
MPI_Refinement.cc
,
MPI_Refine_Master.cc
,
MPI_Refine_Emperor.cc
,
MPI_LoopHashRefine_Master.cc
,
MPI_LoopHashRefine_Emperor.cc
,
MPI_LoopHashRefine.cc
,
MPI_WorkUnitManager_Slave.cc
- u -
UPPER_MULTIPLE :
ShapeComplementarityCalculator.cc
- v -
viewer_pose :
util.cc
,
AddMover.cc
- x -
XFORM_SCORE_FILE_VERSION :
util.cc
,
xfrags.cc
XX :
superimpose.cc
,
PCA.cc
,
ResidualDipolarCoupling.cc
,
superimpose.cc
- y -
YY :
ResidualDipolarCoupling.cc
,
superimpose.cc
,
PCA.cc
- z -
ZZ :
ResidualDipolarCoupling.cc
,
superimpose.cc
,
PCA.cc
Generated on Tue Jul 4 2017 10:39:12 for Rosetta by
1.8.7
1.8.7
