design Directory Reference

Directory dependency graph for design:

Files
file	AntibodyDesignEnum.hh
	Antibody Design enumerators.
file	AntibodyDesignEnumManager.cc
file	AntibodyDesignEnumManager.fwd.hh
file	AntibodyDesignEnumManager.hh
file	AntibodyDesignMover.cc
	Class that initially designs antibodies through grafting using an AntibodyDatabase + North_AHO numbering scheme.
file	AntibodyDesignMover.fwd.hh
file	AntibodyDesignMover.hh
	Class that initially designs antibodies through grafting using an AntibodyDatabase + North_AHO numbering scheme.
file	AntibodyDesignMoverCreator.hh
file	AntibodyDesignProtocol.cc
	Handles the Antibody Design Protocol.
file	AntibodyDesignProtocol.fwd.hh
	Handles all loading of CDR, Framework, and cluster/dmap info from database file.
file	AntibodyDesignProtocol.hh
	Handles the Antibody Design Protocol.
file	AntibodyDesignProtocolCreator.hh
file	AntibodySeqDesignTFCreator.cc
	Class for generating TaskFactories and TaskOperations for antibody design from a set of options.
file	AntibodySeqDesignTFCreator.fwd.hh
file	AntibodySeqDesignTFCreator.hh
	Class for creating a TaskFactory from SeqDesignOptions for use in various protocols.
file	CDRGraftDesignOptions.cc
file	CDRGraftDesignOptions.fwd.hh
file	CDRGraftDesignOptions.hh
	GraftDesign options class and parser.
file	CDRSeqDesignOptions.cc
file	CDRSeqDesignOptions.fwd.hh
file	CDRSeqDesignOptions.hh
	Option control for Sequence Design of a single CDR.
file	GeneralAntibodyModeler.cc
file	GeneralAntibodyModeler.fwd.hh
file	GeneralAntibodyModeler.hh
file	MutateFrameworkForCluster.cc
file	MutateFrameworkForCluster.fwd.hh
file	MutateFrameworkForCluster.hh
	Mutates Framework regions after insertion of a particular cluster.
file	MutateFrameworkForClusterCreator.hh
file	NativeAntibodySeq.cc
file	NativeAntibodySeq.fwd.hh
file	NativeAntibodySeq.hh
file	util.cc
file	util.hh
	Utility functions for antibody design namespace.