pyrosetta.io Namespace Reference

Functions
def	pose_from_pdb
def	pose_from_sequence
def	poses_from_silent

Function Documentation

def pyrosetta.io.pose_from_pdb

(

filename

)

def pyrosetta.io.pose_from_sequence	(		seq,
			res_type = "fa_standard",
			auto_termini = True
	)

Returns a pose generated from a single-letter sequence of amino acid
residues in <seq> using the <res_type> ResidueType and creates N- and C-
termini if <auto_termini> is set to True.

Unlike make_pose_from_sequence(), this method generates a default PDBInfo
and sets all torsion angles to 180 degrees.

Example:
    pose = pose_from_sequence("THANKSEVAN")
See also:
    Pose
    make_pose_from_sequence()
    pose_from_file()
    pose_from_rcsb()

References name, and basic::options::OptionKeys::relax::range.range.

Referenced by demo.D030_Fold_tree.fold_tree().

def pyrosetta.io.poses_from_silent

(

silent_filename

)

Returns an Iterator object which is composed of Pose objects from a silent
file.

@atom-moyer