basic::options::OptionKeys::rna::denovo::out Namespace Reference

Variables
BooleanOptionKey const	out
BooleanOptionKey const	output_lores_silent_file
BooleanOptionKey const	dump
BooleanOptionKey const	binary_output
StringOptionKey const	output_score_file
IntegerOptionKey const	output_score_frequency
ResidueChainVectorOptionKey const	output_jump_res
BooleanOptionKey const	output_jump_o3p_to_o5p
BooleanOptionKey const	output_jump_chainbreak
BooleanOptionKey const	output_rotation_vector
StringOptionKey const	output_jump_reference_RT
RealVectorOptionKey const	target_xyz
BooleanOptionKey const	save_jump_histogram
StringOptionKey const	output_histogram_file
RealOptionKey const	jump_histogram_boxsize
RealOptionKey const	jump_histogram_binwidth
RealOptionKey const	jump_histogram_binwidth_rotvector

Variable Documentation

BooleanOptionKey const basic::options::OptionKeys::rna::denovo::out::binary_output

Referenced by add_rosetta_options_13(), and main().

BooleanOptionKey const basic::options::OptionKeys::rna::denovo::out::dump

Referenced by add_rosetta_options_13(), and main().

RealOptionKey const basic::options::OptionKeys::rna::denovo::out::jump_histogram_binwidth

Referenced by add_rosetta_options_13().

RealOptionKey const basic::options::OptionKeys::rna::denovo::out::jump_histogram_binwidth_rotvector

Referenced by add_rosetta_options_13().

RealOptionKey const basic::options::OptionKeys::rna::denovo::out::jump_histogram_boxsize

Referenced by add_rosetta_options_13().

BooleanOptionKey const basic::options::OptionKeys::rna::denovo::out::out

Referenced by add_rosetta_options_13(), calc_rama_scores(), calc_scores(), numeric::AgglomerativeHierarchicalClusterer::cluster(), basic::ComparingTracer::ComparingTracer(), utility::file::create_blank_file(), numeric::geometry::hashing::xyzStripeHash::debug_pdb(), supercharge::design_supercharge(), dump_table(), fmt::internal::format_system_error(), fmt::format_system_error(), go_main(), utility::file::gunzip(), harvest_motifs(), interface_residue_ddg(), is_interface_residue(), main(), nucleobase_probe_score_test(), utility::io::izstream::open(), utility::io::ozstream::open(), utility::io::ozstream::open_append(), numeric::kinematic_closure::operator<<(), numeric::kdtree::operator<<(), basic::resource_manager::operator<<(), numeric::operator<<(), basic::sampling::orientations::operator<<(), utility::tag::operator<<(), output_packstat_pdb(), output_results(), print_pep_csts(), register_options(), rna_sequence_recovery_metrics(), run(), ScoreFragmentSetMover::run(), run_pep_prep(), RunPepSpec(), utility::tag::Tag::setOption(), setup_mask(), basic::resource_manager::locator::FileSystemResourceLocator::show(), basic::TracerToFile::TracerToFile(), fmt::internal::ArgFormatterBase< ArgFormatter< Char >, Char, FormatSpec >::visit_char(), fmt::BasicWriter< Char >::write_double(), fmt::BasicWriter< Char >::write_str(), numeric::write_tensor_to_file(), numeric::write_tensor_to_file_without_json(), basic::resource_manager::write_type< bool >(), and utility::io::write_vector().

StringOptionKey const basic::options::OptionKeys::rna::denovo::out::output_histogram_file

Referenced by add_rosetta_options_13().

BooleanOptionKey const basic::options::OptionKeys::rna::denovo::out::output_jump_chainbreak

Referenced by add_rosetta_options_13().

BooleanOptionKey const basic::options::OptionKeys::rna::denovo::out::output_jump_o3p_to_o5p

Referenced by add_rosetta_options_13().

StringOptionKey const basic::options::OptionKeys::rna::denovo::out::output_jump_reference_RT

Referenced by add_rosetta_options_13().

ResidueChainVectorOptionKey const basic::options::OptionKeys::rna::denovo::out::output_jump_res

Referenced by add_rosetta_options_13().

BooleanOptionKey const basic::options::OptionKeys::rna::denovo::out::output_lores_silent_file

Referenced by add_rosetta_options_13(), and main().

BooleanOptionKey const basic::options::OptionKeys::rna::denovo::out::output_rotation_vector

Referenced by add_rosetta_options_13().

StringOptionKey const basic::options::OptionKeys::rna::denovo::out::output_score_file

Referenced by add_rosetta_options_13().

IntegerOptionKey const basic::options::OptionKeys::rna::denovo::out::output_score_frequency

Referenced by add_rosetta_options_13().

BooleanOptionKey const basic::options::OptionKeys::rna::denovo::out::save_jump_histogram

Referenced by add_rosetta_options_13().

RealVectorOptionKey const basic::options::OptionKeys::rna::denovo::out::target_xyz

Referenced by add_rosetta_options_13().