jd2 Namespace Reference

Functions
BooleanOptionKey const	jd2 ("jd2")
BooleanOptionKey const	pose_input_stream ("jd2:pose_input_stream")
BooleanOptionKey const	lazy_silent_file_reader ("jd2:lazy_silent_file_reader")
BooleanOptionKey const	mpi_nowait_for_remaining_jobs ("jd2:mpi_nowait_for_remaining_jobs")
RealOptionKey const	mpi_timeout_factor ("jd2:mpi_timeout_factor")
BooleanOptionKey const	mpi_work_partition_job_distributor ("jd2:mpi_work_partition_job_distributor")
BooleanOptionKey const	mpi_file_buf_job_distributor ("jd2:mpi_file_buf_job_distributor")
BooleanOptionKey const	mpi_filebuf_jobdistributor ("jd2:mpi_filebuf_jobdistributor")
BooleanOptionKey const	mpi_fast_nonblocking_output ("jd2:mpi_fast_nonblocking_output")
BooleanOptionKey const	dd_parser ("jd2:dd_parser")
IntegerOptionKey const	ntrials ("jd2:ntrials")
StringOptionKey const	generic_job_name ("jd2:generic_job_name")
BooleanOptionKey const	no_output ("jd2:no_output")
BooleanOptionKey const	enzdes_out ("jd2:enzdes_out")
IntegerOptionKey const	buffer_silent_output ("jd2:buffer_silent_output")
RealOptionKey const	buffer_flush_frequency ("jd2:buffer_flush_frequency")
BooleanOptionKey const	delete_old_poses ("jd2:delete_old_poses")
FileOptionKey const	checkpoint_file ("jd2:checkpoint_file")
BooleanOptionKey const	failed_job_exception ("jd2:failed_job_exception")
IntegerOptionKey const	max_nstruct_in_memory ("jd2:max_nstruct_in_memory")
BooleanOptionKey const	sequential_mpi_job_distribution ("jd2:sequential_mpi_job_distribution")
BooleanOptionKey const	grid_ensemble ("jd2:grid_ensemble")
BooleanOptionKey const	seed_ensemble ("jd2:seed_ensemble")
RealVectorOptionKey const	seed_ensemble_weights ("jd2:seed_ensemble_weights")
FileOptionKey const	seed_ensemble_weights_file ("jd2:seed_ensemble_weights_file")

Function Documentation

RealOptionKey const jd2::buffer_flush_frequency

(

"jd2:buffer_flush_frequency"

)

IntegerOptionKey const jd2::buffer_silent_output

(

"jd2:buffer_silent_output"

)

FileOptionKey const jd2::checkpoint_file

(

"jd2:checkpoint_file"

)

BooleanOptionKey const jd2::dd_parser

(

"jd2:dd_parser"

)

BooleanOptionKey const jd2::delete_old_poses

(

"jd2:delete_old_poses"

)

BooleanOptionKey const jd2::enzdes_out

(

"jd2:enzdes_out"

)

BooleanOptionKey const jd2::failed_job_exception

(

"jd2:failed_job_exception"

)

StringOptionKey const jd2::generic_job_name

(

"jd2:generic_job_name"

)

BooleanOptionKey const jd2::grid_ensemble

(

"jd2:grid_ensemble"

)

BooleanOptionKey const jd2::jd2

(

"jd2"

)

BooleanOptionKey const jd2::lazy_silent_file_reader

(

"jd2:lazy_silent_file_reader"

)

IntegerOptionKey const jd2::max_nstruct_in_memory

(

"jd2:max_nstruct_in_memory"

)

BooleanOptionKey const jd2::mpi_fast_nonblocking_output

(

"jd2:mpi_fast_nonblocking_output"

)

BooleanOptionKey const jd2::mpi_file_buf_job_distributor

(

"jd2:mpi_file_buf_job_distributor"

)

BooleanOptionKey const jd2::mpi_filebuf_jobdistributor

(

"jd2:mpi_filebuf_jobdistributor"

)

BooleanOptionKey const jd2::mpi_nowait_for_remaining_jobs

(

"jd2:mpi_nowait_for_remaining_jobs"

)

RealOptionKey const jd2::mpi_timeout_factor

(

"jd2:mpi_timeout_factor"

)

BooleanOptionKey const jd2::mpi_work_partition_job_distributor

(

"jd2:mpi_work_partition_job_distributor"

)

BooleanOptionKey const jd2::no_output

(

"jd2:no_output"

)

IntegerOptionKey const jd2::ntrials

(

"jd2:ntrials"

)

BooleanOptionKey const jd2::pose_input_stream

(

"jd2:pose_input_stream"

)

BooleanOptionKey const jd2::seed_ensemble

(

"jd2:seed_ensemble"

)

RealVectorOptionKey const jd2::seed_ensemble_weights

(

"jd2:seed_ensemble_weights"

)

FileOptionKey const jd2::seed_ensemble_weights_file

(

"jd2:seed_ensemble_weights_file"

)

BooleanOptionKey const jd2::sequential_mpi_job_distribution

(

"jd2:sequential_mpi_job_distribution"

)