Functions
def	execute

def	update_source_file

def	get_compiler_family

def	install_llvm_tool

def	install_pybind11

def	main

def	is_dir_banned

def	get_rosetta_system_include_directories

def	get_rosetta_include_directories

def	get_defines

def	execute

def	get_cmake_compiler_options

def	install_llvm_tool

def	get_compiler_version

def	get_binding_build_root

def	symlink

def	symlink_tree

def	link_supplemental_files

def	setup_source_directory_links

def	generate_rosetta_external_cmake_files

def	generate_rosetta_cmake_files

def	generate_cmake_file

def	cmake_needs_to_be_run

def	run_cmake

def	generate_bindings

def	build_generated_bindings

def	generate_version_file

def	generate_documentation

def	create_package

def	create_wheel

Variables
tuple	PlatformBits = platform.architecture()

tuple	_machine_name_ = os.uname()

string	_python_version_ = '{}.{}'

string	_pybind11_version_ = '2d0507db43cd5a117f7843e053b17dffca114107'

string	_script_version_ = '1.1'

string	_banned_dirs_ = 'src/utility/pointer'

string	_banned_headers_ = 'utility/py/PyHelper.hh utility/keys/KeyCount.hh utility/keys/KeyLookup.functors.hh'

string	_documentation_version_template_

Function Documentation

def build.build_generated_bindings ( rosetta_source_path )

Build generate bindings

References execute(), pyrosetta.tests.distributed.test_dask.format, and get_binding_build_root().

Referenced by create_wheel().

def build.cmake_needs_to_be_run ( rosetta_source_path )

Perform some basic sanity checks on build directory to see if cmake was run before. This should help for cases when build script was aborted during rebuilds.

References get_binding_build_root().

Referenced by generate_bindings().

def build.create_package	(	rosetta_source_path,
		path
	)

References pyrosetta.tests.distributed.test_dask.format, generate_version_file(), get_binding_build_root(), fmt.print(), and binder.split().

Referenced by create_wheel().

def build.create_wheel	(	rosetta_source_path,
		wheel_path
	)

References build_generated_bindings(), create_package(), execute(), pyrosetta.tests.distributed.test_dask.format, generate_bindings(), generate_documentation(), get_binding_build_root(), install_llvm_tool(), ObjexxFCL.len(), link_supplemental_files(), main(), and fmt.print().

def build.execute	(	message,
		command_line,
		return_ = `'status'`,
		until_successes = `False`,
		terminate_on_failure = `True`,
		silent = `False`
	)

References pyrosetta.tests.distributed.test_dask.format, and fmt.print().

Referenced by build_generated_bindings(), create_wheel(), execute(), generate_bindings(), generate_cmake_file(), generate_documentation(), get_compiler_version(), install_llvm_tool(), install_pybind11(), and run_cmake().

def build.execute	(	message,
		command_line,
		return_ = `'status'`,
		until_successes = `False`,
		terminate_on_failure = `True`,
		silent = `False`,
		silence_output = `False`
	)

References execute(), pyrosetta.tests.distributed.test_dask.format, get_compiler_family(), basic::database.open(), fmt.print(), ObjexxFCL.read(), and update_source_file().

Referenced by build-and-run-tests.run_binder_self_tests().

def build.generate_bindings ( rosetta_source_path )

Generate bindings using binder tools and return list of source files

References cmake_needs_to_be_run(), execute(), pyrosetta.tests.distributed.test_dask.format, generate_cmake_file(), get_binding_build_root(), get_defines(), get_rosetta_include_directories(), get_rosetta_system_include_directories(), is_dir_banned(), fmt.join(), ObjexxFCL.len(), basic::options::OptionKeys::in::file.list, basic::database.open(), fmt.print(), ObjexxFCL.read(), run_cmake(), setup_source_directory_links(), and binder.split().

Referenced by create_wheel().

def build.generate_cmake_file	(	rosetta_source_path,
		extra_sources
	)

generate cmake file in bindings source location

References execute(), pyrosetta.tests.distributed.test_dask.format, generate_rosetta_cmake_files(), generate_rosetta_external_cmake_files(), get_binding_build_root(), get_defines(), get_rosetta_include_directories(), get_rosetta_system_include_directories(), fmt.join(), basic::database.open(), and update_source_file().

Referenced by generate_bindings().

def build.generate_documentation	(	rosetta_source_path,
		path,
		version
	)

References execute(), pyrosetta.tests.distributed.test_dask.format, generate_version_file(), get_binding_build_root(), basic::database.open(), and fmt.print().

Referenced by create_wheel().

def build.generate_rosetta_cmake_files	(	rosetta_source_path,
		prefix
	)

References pyrosetta.tests.distributed.test_dask.format, fmt.join(), basic::options::OptionKeys::cloud.key, ObjexxFCL.len(), basic::database.open(), and update_source_file().

Referenced by generate_cmake_file().

def build.generate_rosetta_external_cmake_files	(	rosetta_source_path,
		prefix
	)

References pyrosetta.tests.distributed.test_dask.format, fmt.join(), ObjexxFCL.len(), basic::options::OptionKeys::in::file.list, basic::database.open(), binder.split(), and update_source_file().

Referenced by generate_cmake_file().

def build.generate_version_file	(	rosetta_source_path,
		file_name
	)

Referenced by create_package(), and generate_documentation().

def build.get_binding_build_root	(	rosetta_source_path,
		source = `False`,
		build = `False`,
		documentation = `False`
	)

Calculate bindings build path using current platform and compilation settings and create dir if it is not there yet

References get_compiler_family(), and get_compiler_version().

Referenced by build_generated_bindings(), cmake_needs_to_be_run(), create_package(), create_wheel(), generate_bindings(), generate_cmake_file(), generate_documentation(), link_supplemental_files(), run_cmake(), and setup_source_directory_links().

def build.get_cmake_compiler_options ( )

Get cmake compiler flags from Options.compiler

Referenced by install_llvm_tool(), and run_cmake().

def build.get_compiler_family ( )

Try to guess compiler family using Options.compiler

Referenced by execute(), get_binding_build_root(), and get_compiler_version().

def build.get_compiler_version ( )

References execute(), pyrosetta.tests.distributed.test_dask.format, get_compiler_family(), and binder.split().

Referenced by get_binding_build_root().

def build.get_defines ( )

return list of #defines

Referenced by generate_bindings(), and generate_cmake_file().

def build.get_rosetta_include_directories ( )

return list of include directories for compilation

References binder.split().

Referenced by generate_bindings(), and generate_cmake_file().

def build.get_rosetta_system_include_directories ( )

return list of include directories for compilation

References binder.split().

Referenced by generate_bindings(), and generate_cmake_file().

def build.install_llvm_tool	(	name,
		source_location,
		prefix,
		debug,
		jobs = `1`,
		clean = `True`,
		gcc_install_prefix = `None`
	)

Install and update (if needed) custom LLVM tool at given prefix (from config).
    Return absolute path to executable on success and terminate with error on failure

References execute(), pyrosetta.tests.distributed.test_dask.format, basic::database.open(), and fmt.print().

Referenced by create_wheel(), install_llvm_tool(), and main().

def build.install_llvm_tool	(	name,
		source_location,
		prefix_root,
		debug,
		clean = `True`
	)

Install and update (if needed) custom LLVM tool at given prefix (from config).
    Return absolute path to executable on success and terminate with error on failure

References execute(), pyrosetta.tests.distributed.test_dask.format, get_cmake_compiler_options(), install_llvm_tool(), basic::database.open(), and fmt.print().

Referenced by build-and-run-tests.main().

def build.install_pybind11	(	prefix,
		clean = `True`
	)

Download and install PyBind11 library at given prefix. Install version specified by _pybind11_version_ sha1

References execute(), pyrosetta.tests.distributed.test_dask.format, and fmt.print().

Referenced by build-and-run-tests.main(), and main().

def build.is_dir_banned ( directory )

Referenced by generate_bindings().

def build.link_supplemental_files ( rosetta_source_path )

References get_binding_build_root(), symlink(), and symlink_tree().

Referenced by create_wheel().

def build.main ( args )

Binding demo build/test script

PyRosetta building script

References pyrosetta.tests.distributed.test_dask.format, install_llvm_tool(), install_pybind11(), and fmt.print().

Referenced by create_wheel().

def build.run_cmake ( rosetta_source_path )

Build generate bindings

References execute(), pyrosetta.tests.distributed.test_dask.format, get_binding_build_root(), and get_cmake_compiler_options().

Referenced by generate_bindings().

def build.setup_source_directory_links ( rosetta_source_path )

References pyrosetta.tests.distributed.test_dask.format, and get_binding_build_root().

Referenced by generate_bindings().

def build.symlink	(	source,
		dest
	)

Similar to os.symlink but if dest is alread exisist and if type of *source and *dest does not match or if link points to different location : remove dest first

Referenced by link_supplemental_files(), and symlink_tree().

def build.symlink_tree	(	source,
		dest
	)

Similar to symlink(...) above but recursivly recreate dir tree at dest and symlink all files

References ObjexxFCL.len(), and symlink().

Referenced by link_supplemental_files().

def build.update_source_file	(	file_name,
		data
	)

write data to a file but only if file does not exist or it content different from data

write data to a file but only if file does not exist or it content different from data
    return True if file was written and False otherwise

References basic::database.open(), fmt.print(), and ObjexxFCL.read().

Referenced by execute(), binder::Context.generate(), generate_cmake_file(), generate_rosetta_cmake_files(), and generate_rosetta_external_cmake_files().

Variable Documentation

string build._banned_dirs_ = 'src/utility/pointer'

string build._banned_headers_ = 'utility/py/PyHelper.hh utility/keys/KeyCount.hh utility/keys/KeyLookup.functors.hh'

string build._documentation_version_template_

Initial value:

 = '''
 
 .. _version-json-file:
 
 Version
 -------
 
 .. code-block:: javascript
 
 '''

tuple build._machine_name_ = os.uname()

string build._pybind11_version_ = '2d0507db43cd5a117f7843e053b17dffca114107'

string build._python_version_ = '{}.{}'

string build._script_version_ = '1.1'

tuple build.PlatformBits = platform.architecture()

Functions

Variables

Function Documentation

Variable Documentation