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| file   | FindConsensusSequence.cc | 
|   | Takes in multiple poses from the VectorPoseJobDistributor and finds the consensus sequence that optimizes energy of all input poses. Used in conjuction with MSDMover at the end of a protocol to make sure that you end up with one multistate solution. Only accessible through recon application. 
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| file   | FindConsensusSequence.fwd.hh | 
|   | Finds the consensus sequence that optimizes energy of all input poses. Used in RECON msd application. 
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| file   | FindConsensusSequence.hh | 
|   | Takes in multiple poses from the VectorPoseJobDistributor and finds the consensus sequence that optimizes energy of all input poses. Used in conjuction with MSDMover at the end of a protocol to make sure that you end up with one multistate solution. Only accessible through recon application. 
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| file   | FindConsensusSequenceCreator.hh | 
|   | Multistate design mover used for RECON msd application. 
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| file   | FitnessFilter.cc | 
|   | Returns the sum of energy of input poses. Only accessible through recon application. 
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| file   | FitnessFilter.fwd.hh | 
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| file   | FitnessFilter.hh | 
|   | Returns the sum of energy of input poses. Only accessible through recon application. 
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| file   | FitnessFilterCreator.hh | 
|   | FilterCreators for the FitnessFilterCreator. 
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| file   | MSDMover.cc | 
|   | Multistate design mover used for RECON multistate design Takes in multiple poses, applies residue linking constraints based on sequence of all input poses and runs a design submover that has been specified in the tag Only accessible through recon application. 
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| file   | MSDMover.fwd.hh | 
|   | Multistate design mover used for RECON MSD application. 
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| file   | MSDMover.hh | 
|   | Multistate design mover used for RECON multistate design Takes in multiple poses, applies residue linking constraints based on sequence of all input poses and runs a design submover that has been specified in the tag Only accessible through recon application. 
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| file   | MSDMoverCreator.hh | 
|   | Multistate design mover used for RECON MSD application. Only accessible through recon application. 
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| file   | recon_util.cc | 
|   | Utility functions for the recon_design namespace. 
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| file   | recon_util.hh | 
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