constraint_generator Directory Reference

Directory dependency graph for constraint_generator:

Files
file	AddConstraints.cc
	Adds constraints generated by ConstraintGenerators to a pose.
file	AddConstraints.fwd.hh
	Adds constraints generated by ConstraintGenerators to a pose.
file	AddConstraints.hh
	Adds constraints generated by ConstraintGenerators to a pose.
file	AddConstraintsCreator.hh
	Adds constraints generated by ConstraintGenerators to a pose.
file	AtomPairConstraintGenerator.cc
	Generates atom pair constraints for a set of residues from the current or reference pose.
file	AtomPairConstraintGenerator.fwd.hh
	Generates atom pair constraints for a set of residues from the current or reference pose.
file	AtomPairConstraintGenerator.hh
	Generates atom pair constraints for a set of residues from the current or reference pose.
file	AtomPairConstraintGeneratorCreator.hh
	Generates atom pair constraints for a set of residues from the current or reference pose.
file	ConstraintGenerator.cc
	Abstract class for generating constraints.
file	ConstraintGenerator.fwd.hh
file	ConstraintGenerator.hh
	abstract base class that generates constraints
file	ConstraintGeneratorCreator.fwd.hh
	Forward declaration of a class that instantiates a particular ConstraintGenerator.
file	ConstraintGeneratorCreator.hh
	Class for instantiating a particular ConstraintGenerator.
file	ConstraintGeneratorFactory.cc
	Implementation of the class for instantiating arbitrary ConstraintGenerators from a string –> ConstraintGeneratorCreator map.
file	ConstraintGeneratorFactory.hh
file	ConstraintGeneratorRegistrator.hh
	Declaration of the template class for registrating ConstraintGeneratorCreators with the ConstriantGeneratorFactory.
file	ConstraintsManager.cc
	Manages lists of constraints generated by ConstraintGenerators.
file	ConstraintsManager.fwd.hh
	Manages lists of constraints generated by ConstraintGenerators.
file	ConstraintsManager.hh
	Manages lists of constraints generated by ConstraintGenerators.
file	ConstraintsMap.cc
	Cacheable data map to cache constraint pointers in the pose.
file	ConstraintsMap.fwd.hh
	Cacheable data map to cache constraint pointers in the pose.
file	ConstraintsMap.hh
	Cacheable data map to cache constraint pointers in the pose.
file	CoordinateConstraintGenerator.cc
	Generates coodinate constraints.
file	CoordinateConstraintGenerator.fwd.hh
	Generates coodinate constraints.
file	CoordinateConstraintGenerator.hh
	Generates coodinate constraints.
file	CoordinateConstraintGeneratorCreator.hh
	Generates coodinate constraints.
file	DihedralConstraintGenerator.cc
	A cst generator that creates Dihedral constraints for specified residues using a residue selector.
file	DihedralConstraintGenerator.fwd.hh
	A cst generator that creates Dihedral constraints for specified residues using a residue selector.
file	DihedralConstraintGenerator.hh
	A cst generator that creates Dihedral constraints for specified residues using a residue selector.
file	DihedralConstraintGeneratorCreator.hh
	A cst generator that creates Dihedral constraints for specified residues using a residue selector.
file	DistanceConstraintGenerator.cc
	Generates AtomPair constraints to enforce a given distance between two residue subsets.
file	DistanceConstraintGenerator.fwd.hh
	Generates AtomPair constraints to enforce a given distance between two residue subsets.
file	DistanceConstraintGenerator.hh
	Generates AtomPair constraints to enforce a given distance between two residue subsets.
file	DistanceConstraintGeneratorCreator.hh
	Generates AtomPair constraints to enforce a given distance between two residue subsets.
file	HydrogenBondConstraintGenerator.cc
file	HydrogenBondConstraintGenerator.fwd.hh
file	HydrogenBondConstraintGenerator.hh
file	HydrogenBondConstraintGeneratorCreator.hh
	Base class for ConstraintCreators for the Constraint.
file	MembraneSpanConstraintGenerator.cc
	Generates constraints for membrane spans to stay in the membrane.
file	MembraneSpanConstraintGenerator.fwd.hh
	Generates constraints for membrane spans to stay in the membrane.
file	MembraneSpanConstraintGenerator.hh
	Generates constraints for membrane spans to stay in the membrane.
file	MembraneSpanConstraintGeneratorCreator.hh
	Generates constraints for membrane spans to stay in the membrane.
file	MetalContactsConstraintGenerator.cc
	This constraint generator takes residue selectors for a residue/residues containing metal ion(s) and for residue(s) for which to set up contacts. It allows users to specify which base atoms will be used to define angles/dihedrals to constrain; ideal values for angles/dihedrals/distances; and an option to constrain to native values.
file	MetalContactsConstraintGenerator.fwd.hh
	This constraint generator takes residue selectors for a residue/residues containing metal ion(s) and for residue(s) for which to set up contacts. It allows users to specify which base atoms will be used to define angles/dihedrals to constrain; ideal values for angles/dihedrals/distances; and an option to constrain to native values.
file	MetalContactsConstraintGenerator.hh
	This constraint generator takes residue selectors for a residue containing metal ion(s) and for residue(s) for which to set up contacts. It allows users to specify which base atoms will be used to define angles/dihedrals to constrain; ideal values for angles/dihedrals/distances; and an option to constrain to native values.
file	MetalContactsConstraintGeneratorCreator.hh
	This constraint generator takes residue selectors for a residue/residues containing metal ion(s) and for residue(s) for which to set up contacts. It allows users to specify which base atoms will be used to define angles/dihedrals to constrain; ideal values for angles/dihedrals/distances; and an option to constrain to native values.
file	RemoveConstraints.cc
	Removes constraints generated by a ConstraintGenerator.
file	RemoveConstraints.fwd.hh
	Removes constraints generated by a ConstraintGenerator.
file	RemoveConstraints.hh
	Removes constraints generated by a ConstraintGenerator.
file	RemoveConstraintsCreator.hh
	Removes constraints generated by a ConstraintGenerator.
file	ResidueTypeConstraintGenerator.cc
	Generates residue type constraints for a set of residues from the current or reference pose.
file	ResidueTypeConstraintGenerator.fwd.hh
	Generates residue type constraints for a set of residues from the current or reference pose.
file	ResidueTypeConstraintGenerator.hh
	Generates residue type constraints for a set of residues from the current or reference pose.
file	ResidueTypeConstraintGeneratorCreator.hh
	Generates residue type constraints for a set of residues from the current pose.
file	TerminiConstraintGenerator.cc
	Generates distance constraints between the upper and lower termini.
file	TerminiConstraintGenerator.fwd.hh
	Generates distance constraints between the upper and lower termini.
file	TerminiConstraintGenerator.hh
	Generates distance constraints between the upper and lower termini.
file	TerminiConstraintGeneratorCreator.hh
	Generates distance constraints between the upper and lower termini.
file	util.cc
	Utility functions for constraint generators.
file	util.hh
	Utility functions for constraint generators.