sampling Directory Reference

Directory dependency graph for sampling:

Directories
directory	requirements

Files
file	LegacyAddStartnodeFragments.cc
file	LegacyAddStartnodeFragments.fwd.hh
file	LegacyAddStartnodeFragments.hh
	A Mover that uses loophash to find fragments that can bridge a gap with minimal modifications to the original pose.
file	LegacyAddStartnodeFragmentsCreator.hh
file	LegacyAppendAssemblyMover.cc
file	LegacyAppendAssemblyMover.fwd.hh
file	LegacyAppendAssemblyMover.hh
	A Mover that uses loophash to find fragments that can bridge a gap with minimal modifications to the original pose.
file	LegacyAppendAssemblyMoverCreator.hh
file	LegacyAssemblyConstraintsMover.cc
file	LegacyAssemblyConstraintsMover.fwd.hh
file	LegacyAssemblyConstraintsMover.hh
	A simple mover that reads a NativeRotamersFile generated by a an AssemblyMover run and generates the necessary ResidueType constraints to add to the pose.
file	LegacyAssemblyConstraintsMoverCreator.hh
file	LegacyAssemblyMover.cc
file	LegacyAssemblyMover.fwd.hh
file	LegacyAssemblyMover.hh
file	LegacyAssemblyMoverCreator.hh
file	LegacyEnumerateAssemblyMover.cc
	Enumerate every possible assembly exhaustively.
file	LegacyEnumerateAssemblyMover.fwd.hh
file	LegacyEnumerateAssemblyMover.hh
file	LegacyEnumerateAssemblyMoverCreator.hh
file	LegacyGivenPathAssemblyMover.cc
file	LegacyGivenPathAssemblyMover.fwd.hh
file	LegacyGivenPathAssemblyMover.hh
	This Mover generates assemblies by taking the best edge possible for each addition. This process is repeated cycles times and the best overall Assembly that was found is returned.
file	LegacyGivenPathAssemblyMoverCreator.hh
file	LegacyGreedyAssemblyMover.cc
file	LegacyGreedyAssemblyMover.fwd.hh
file	LegacyGreedyAssemblyMover.hh
	This Mover generates assemblies by taking the best edge possible for each addition. This process is repeated cycles times and the best overall Assembly that was found is returned.
file	LegacyGreedyAssemblyMoverCreator.hh
file	LegacyLoophashAssemblyMover.cc
	Derived from AssemblyMover, this mover generates an assembly and then uses Loophash segments to connect any broken segments resulting from the assembly process.
file	LegacyLoophashAssemblyMover.fwd.hh
file	LegacyLoophashAssemblyMover.hh
	A Mover that uses loophash to find fragments that can bridge a gap with minimal modifications to the original pose.
file	LegacyLoophashAssemblyMoverCreator.hh
file	LegacyMonteCarloAssemblyMover.cc
	Assembly substructures by MonteCarlo way.
file	LegacyMonteCarloAssemblyMover.fwd.hh
file	LegacyMonteCarloAssemblyMover.hh
	Assembly substructures by LegacyMonteCarlo way.
file	LegacyMonteCarloAssemblyMoverCreator.hh
file	LegacyNodeConstraintAssemblyMover.cc
file	LegacyNodeConstraintAssemblyMover.fwd.hh
file	LegacyNodeConstraintAssemblyMover.hh
	A Mover that combines Smotif models into a continuous protein design.
file	LegacyNodeConstraintAssemblyMoverCreator.hh
file	LegacyReadNativeRotamersFileCreator.hh
file	LegacyReadRepeatNativeRotamersFileCreator.hh
file	LegacyRehashAssemblyMover.cc
	Derived from AssemblyMover, this mover generates an assembly and then uses Loophash segments to connect any broken segments resulting from the assembly process.
file	LegacyRehashAssemblyMover.fwd.hh
file	LegacyRehashAssemblyMover.hh
	A Mover that uses more legacy_sewing to close gaps from discontinous assemblies.
file	LegacyRehashAssemblyMoverCreator.hh
file	LegacyRepeatAssemblyMover.cc
file	LegacyRepeatAssemblyMover.fwd.hh
file	LegacyRepeatAssemblyMover.hh
	An AssemblyMover specific for repeating backbones. This Mover is currently pretty hacky and makes assumes that every node is exactly 3 segments long, and that the assembly is a continuous assembly.
file	LegacyRepeatAssemblyMoverCreator.hh
file	SewGraph.cc
file	SewGraph.fwd.hh
file	SewGraph.hh