docking Directory Reference

Directory dependency graph for docking:

Directories
directory	membrane
directory	stateless

Files
file	ConformerSwitchMover.cc
	code for the conformer switch mover in ensemble docking
file	ConformerSwitchMover.fwd.hh
	ConformerSwitchMover forward declarations header.
file	ConformerSwitchMover.hh
file	ConformerSwitchMoverCreator.hh
file	DockFilters.cc
file	DockFilters.fwd.hh
file	DockFilters.hh
file	DockingEnsemble.cc
	container class for ensemble docking information to be used with ConformerSwitchMover
file	DockingEnsemble.fwd.hh
file	DockingEnsemble.hh
file	DockingEnsemblePrepackProtocol.cc
	Prepacking of the bound structure before docking with ensembles.
file	DockingEnsemblePrepackProtocol.fwd.hh
file	DockingEnsemblePrepackProtocol.hh
file	DockingHighRes.cc
file	DockingHighRes.fwd.hh
file	DockingHighRes.hh
file	DockingHighResFactory.cc
	Factory for creating DockingHighRes objects.
file	DockingHighResFactory.fwd.hh
	Factory for creating DockingHighRes objects.
file	DockingHighResFactory.hh
	Factory for creating DockingHighRes objects.
file	DockingHighResLegacy.cc
file	DockingHighResLegacy.fwd.hh
	forward declarations for DockingHighResLegacy (high resolution docking protocol as it existed in mini before the GrayLab refactor)
file	DockingHighResLegacy.hh
file	DockingHighResLegacyCreator.hh
	Declaration of the MoverCreator class for DockingHighResLegacy.
file	DockingInitialPerturbation.cc
	initial position functions
file	DockingInitialPerturbation.fwd.hh
file	DockingInitialPerturbation.hh
file	DockingInitialPerturbationCreator.hh
file	DockingLowRes.cc
file	DockingLowRes.fwd.hh
file	DockingLowRes.hh
file	DockingLowResEnsemble.cc
file	DockingLowResEnsemble.fwd.hh
file	DockingLowResEnsemble.hh
file	DockingPrepackProtocol.cc
	Prepacking of the bound sturcture before docking.
file	DockingPrepackProtocol.fwd.hh
file	DockingPrepackProtocol.hh
file	DockingPrepackProtocolCreator.hh
	Declaration of the MoverCreator class for the DockingPrepackProtocol.
file	DockingProtocol.cc
file	DockingProtocol.fwd.hh
file	DockingProtocol.hh
file	DockingProtocolCreator.hh
file	DockingSlideIntoContactCreator.hh
file	DockMCMCycle.cc
file	DockMCMCycle.fwd.hh
	forward declarations for DockMCMCycle (high resolution min) docking
file	DockMCMCycle.hh
file	DockMCMProtocol.cc
file	DockMCMProtocol.fwd.hh
	forward declarations for DockMCMProtocol (high resolution min) docking
file	DockMCMProtocol.hh
	Declaration of the MoverCreator class for the DockMCMProtocol.
file	DockMCMProtocolCreator.hh
file	DockMinMover.cc
file	DockMinMover.fwd.hh
	forward declarations for DockMinMover (high resolution min) docking
file	DockMinMover.hh
file	DockMinMoverCreator.hh
	Declaration of the MoverCreator class for the DockMinMover.
file	DockSetupMover.cc
file	DockSetupMover.fwd.hh
file	DockSetupMover.hh
	allows low-resolution docking using simulated or parallel tempering
file	DockSetupMoverCreator.hh
file	DockTaskFactory.cc
file	DockTaskFactory.fwd.hh
	forward declarations for DockTaskFactory
file	DockTaskFactory.hh
file	EllipsoidalRandomizationMover.cc
file	EllipsoidalRandomizationMover.fwd.hh
	forward declarations for EllipsoidalRandomizationMover (docking initial placement mover)
file	EllipsoidalRandomizationMover.hh
file	metrics.cc
file	metrics.hh
file	RigidBodyInfo.cc
file	RigidBodyInfo.fwd.hh
file	RigidBodyInfo.hh
file	SidechainMinMover.cc
file	SidechainMinMover.fwd.hh
file	SidechainMinMover.hh
file	TemperedDocking.cc
file	TemperedDocking.fwd.hh
file	TemperedDocking.hh
	allows low-resolution docking using simulated or parallel tempering
file	TemperedDockingCreator.hh
file	types.hh
	Additionl types for Docking protocol.
file	util.cc
file	util.hh