per_residue_metrics Directory Reference

Directory dependency graph for per_residue_metrics:

Files
file	HbondMetric.cc
	A metric to report the total h-bonds of a residue, or from a set of residues to another set of residues. Use the SummaryMetric to get total hbonds of a selection or between selections. See the WaterMediatedBridgedHBondMetric for water-mediated h-bonds.
file	HbondMetric.fwd.hh
	A metric to report the total h-bonds of a residue, or from a set of residues to another set of residues. Use the SummaryMetric to get total hbonds of a selection or between selections. See the WaterMediatedBridgedHBondMetric for water-mediated h-bonds.
file	HbondMetric.hh
	A metric to report the total h-bonds of a residue, or from a set of residues to another set of residues. Use the SummaryMetric to get total hbonds of a selection or between selections. See the WaterMediatedBridgedHBondMetric for water-mediated h-bonds.
file	PerResidueClashMetric.cc
	A SimpleMetric that calculates the number of atomic clashes per residue using the LJ radius (at 0). Can use a soft radius, which reduces it by 33%.
file	PerResidueClashMetric.fwd.hh
	A SimpleMetric that calculates the number of atomic clashes per residue using the LJ radius (at 0). Can use a soft radius, which reduces it by 33%.
file	PerResidueClashMetric.hh
	A SimpleMetric that calculates the number of atomic clashes per residue using the LJ radius (at 0).
file	PerResidueDensityFitMetric.cc
	A per-residue metric that will calculate the density fit for each residue using either a correlation or a zscore.
file	PerResidueDensityFitMetric.fwd.hh
	A per-residue metric that will calculate the density fit for each residue using either a correlation or a zscore.
file	PerResidueDensityFitMetric.hh
	A per-residue metric that will calculate the density fit for each residue using either a correlation or a zscore.
file	PerResidueEnergyMetric.cc
	A per-residue metric that will calculate/output per residue total energies or a specific score component. Correctly decomposes energies to per-residue.
file	PerResidueEnergyMetric.fwd.hh
	A per-residue metric that will calculate/output per residue total energies or a specific score component. Correctly decomposes energies to per-residue.
file	PerResidueEnergyMetric.hh
	A per-residue metric that will calculate/output per residue total energies or a specific score component. Correctly decomposes energies to per-residue.
file	PerResidueGlycanLayerMetric.cc
	A metric that outputs the layer of the glycan tree as measured by the residue distance to the root.
file	PerResidueGlycanLayerMetric.fwd.hh
	A metric that outputs the layer of the glycan tree as measured by the residue distance to the root.
file	PerResidueGlycanLayerMetric.hh
	A metric that outputs the layer of the glycan tree as measured by the residue distance to the root.
file	PerResidueRMSDMetric.cc
	A per-residue metric thtat will calculate the RMSD for each residue given in a residue selector to a reference pose.
file	PerResidueRMSDMetric.fwd.hh
	A per-residue metric thtat will calculate the RMSD for each residue given in a residue selector to a reference pose.
file	PerResidueRMSDMetric.hh
	A per-residue metric thtat will calculate the RMSD for each residue given in a residue selector to a reference pose.
file	PerResidueSasaMetric.cc
	A per-residue metric that will calculate SASA for each residue given in a selector.
file	PerResidueSasaMetric.fwd.hh
	A per-residue metric that will calculate SASA for each residue given in a selector.
file	PerResidueSasaMetric.hh
	A per-residue metric that will calculate SASA for each residue given in a selector.
file	WaterMediatedHbondMetric.cc
	A metric to measure hydrogen bonds between a set of residues that are water-mediated. Depth of 1 is default where one water mediates the interface between these residues. Depth can be set. Make sure to use the -include_waters flag to have Rosetta not ignore HOH.
file	WaterMediatedHbondMetric.fwd.hh
	A metric to measure hydrogen bonds between a set of residues that are water-mediated. Depth of 1 is default where one water mediates the interface between these residues. Depth can be set. Make sure to use the -include_waters flag to have Rosetta not ignore HOH.
file	WaterMediatedHbondMetric.hh
	A metric to measure hydrogen bonds between a set of residues that are water-mediated. Depth of 1 is default where one water mediates the interface between these residues. Depth can be set. Make sure to use the -include_waters flag to have Rosetta not ignore HOH.