- v -

• validate_loop_start_stop() : protocols::loops
• valide_include_only_stage() : protocols::scoring::methods::pcs2
• vall_library_from_file() : core::fragment::picking_old::vall
• value_attribute_type_for_option() : protocols::jd3::chunk_library , protocols::jd3::full_model , protocols::jd3
• VARIANT_MAP() : core::chemical
• variants_match() : core::chemical
• variants_match_with_exceptions() : core::chemical
• vdw_cached_rep_screen_info_is_setup() : protocols::scoring
• VDW_FRAG_STORE() : protocols::loops::loop_closure::ccd
• vdw_scale_factor() : core::scoring::methods
• VDW_WEIGHT() : protocols::anchored_design
• VdWShouldItCount() : core::scoring
• vec3_to_stub() : protocols::sic_dock
• vector1_remove() : core::scoring
• vector2disk_in1d() : protocols::recces
• vector2disk_in2d() : protocols::recces
• vector_has_n_trues() : protocols::multistage_rosetta_scripts::cluster
• vector_map_to_comma_strings() : core::conformation::symmetry
• vector_to_comma_strings() : core::conformation::symmetry
• vector_to_rank() : protocols::ligand_docking
• vector_vector_to_FArray2() : protocols::seeded_abinitio , protocols::toolbox
• verify_stage_ID() : protocols::abinitio::abscript
• vertex_exists() : protocols::forge::methods
• vertex_xyz_from_generators() : core::scoring::power_diagram
• viewer_main() : protocols::viewer
• virtual_type_for_conf() : core::conformation
• virtual_type_for_pose() : core::pose
• virtualize_5prime_phosphates() : core::pose::rna
• virtualize_bulges() : protocols::rna::denovo
• virtualize_free_rna_moieties() : core::pose::rna
• virtualize_side_chains() : protocols::stepwise::modeler
• visit_atomtree_node() : protocols::viewer
• visualize_fold_tree() : core::kinematics
• vl_vh_orientation_coords() : protocols::antibody