- _ -

• __add__() : pyrosetta.distributed.viewer.core.Viewer
• __attrs_post_init__() : pyrosetta.distributed.cluster.core.PyRosettaCluster
• __call__() : pyrosetta.distributed.tasks.taskbase.TaskBase , pyrosetta.distributed.viewer.core.Viewer , pyrosetta.EnergyMethod
• __cmp__() : arls_impl.DockingFile
• __contains__() : pyrosetta.bindings.pose.ResidueLabelAccessor
• __del__() : pyrosetta.logging_support.PythonLoggingSink , test.T007_TracerIO.MyPyTracer
• __delitem__() : pyrosetta.bindings.pose.PoseScoreAccessor , pyrosetta.io.silent_file_map.SilentFileMap
• __dir__() : pyrosetta.distributed.docs.InlineDocs
• __enter__() : ez_setup.ContextualZipFile , pyrosetta.distributed.utility.log.LoggingContext , pyrosetta.io.silent_file_map.SilentFileMap , pyrosetta.tests.distributed.test_gil.HeartBeat
• __exit__() : ez_setup.ContextualZipFile , pyrosetta.distributed.utility.log.LoggingContext , pyrosetta.io.silent_file_map.SilentFileMap , pyrosetta.tests.distributed.test_gil.HeartBeat
• __get__() : pyrosetta.distributed.utility.log.classproperty
• __getattr__() : pyrosetta.distributed.docs.InlineDocs
• __getitem__() : pyrosetta.bindings.pose.PoseResidueAccessor , pyrosetta.bindings.pose.PoseResidueLabelAccessor , pyrosetta.bindings.pose.PoseResidueLabelMaskAccessor , pyrosetta.bindings.pose.PoseScoreAccessor , pyrosetta.io.silent_file_map.SilentFileEnergyAccessor , pyrosetta.io.silent_file_map.SilentFileMap , pyrosetta.io.silent_file_map.SilentFilePoseAccessor
• __getstate__() : pyrosetta.distributed.tasks.taskbase.TaskBase
• __hash__() : arls_impl.DockingFile
• __iadd__() : pyrosetta.bindings.pose.PoseResidueAccessor , pyrosetta.distributed.utility.log.ProgressLogger
• __imul__() : pyrosetta.bindings.pose.PoseResidueAccessor
• __init__() : arls_impl.DockingCase , arls_impl.DockingFile , erraser_option.erraser_option , mutant_modeler.MutantModeler , options.KeepSameFile , options_class.Option , PyMOL-Rosetta-relay-client.Matrix , PyMOL-Rosetta-relay-client.PlanePoints , PyMOL-Rosetta-relay-client.PR_UDPServer , PyMOL-Rosetta-relay-client.SecretInputDialog , PyMOL-Rosetta-relay-client.XYZCoord , PyMOL-RosettaServer.Matrix , PyMOL-RosettaServer.PlanePoints , PyMOL-RosettaServer.PR_UDPServer , PyMOL-RosettaServer.XYZCoord , pyrosetta.bindings.pose.PoseResidueAccessor , pyrosetta.bindings.pose.PoseResidueLabelAccessor , pyrosetta.bindings.pose.PoseResidueLabelMaskAccessor , pyrosetta.bindings.pose.PoseScoreAccessor , pyrosetta.bindings.pose.ResidueLabelAccessor , pyrosetta.distributed.cluster.exceptions.InputError , pyrosetta.distributed.cluster.exceptions.InputFileError , pyrosetta.distributed.cluster.exceptions.OutputError , pyrosetta.distributed.cluster.exceptions.WorkerError , pyrosetta.distributed.cluster.logging_support.LoggingSupport , pyrosetta.distributed.docs.ComponentDoc , pyrosetta.distributed.packed_pose.core.PackedPose , pyrosetta.distributed.tasks.rosetta_scripts.BaseRosettaScriptsTask , pyrosetta.distributed.tasks.score.ScorePoseTask , pyrosetta.distributed.utility.log.classproperty , pyrosetta.distributed.utility.log.LoggingContext , pyrosetta.distributed.utility.log.Plog , pyrosetta.distributed.utility.log.ProgressLogger , pyrosetta.distributed.viewer.core.Viewer , pyrosetta.distributed.viewer.core.ViewerInputError , pyrosetta.distributed.viewer.modules.setBackgroundColor , pyrosetta.distributed.viewer.modules.setDisulfides , pyrosetta.distributed.viewer.modules.setHydrogenBonds , pyrosetta.distributed.viewer.modules.setHydrogens , pyrosetta.distributed.viewer.modules.setStyle , pyrosetta.distributed.viewer.modules.setSurface , pyrosetta.distributed.viewer.modules.setZoom , pyrosetta.distributed.viewer.modules.setZoomTo , pyrosetta.distributed.viewer.modules.ViewerInputError , pyrosetta.EnergyMethod , pyrosetta.io.silent_file_map.SilentFileEnergyAccessor , pyrosetta.io.silent_file_map.SilentFileMap , pyrosetta.io.silent_file_map.SilentFilePoseAccessor , pyrosetta.logging_support.PythonLoggingSink , pyrosetta.network.rosetta_udp_to_tcp_bridge.PR_UDPServer , pyrosetta.protocols.h5_fragment_store_provider.H5PyFragmentStoreProvider , pyrosetta.protocols.structure_search.StructureSearchManager , pyrosetta.PyMOLRosettaServer.Matrix , pyrosetta.PyMOLRosettaServer.PlanePoints , pyrosetta.PyMOLRosettaServer.PR_UDPServer , pyrosetta.PyMOLRosettaServer.XYZCoord , pyrosetta.PythonPyExitCallback , pyrosetta.tests.distributed.test_gil.HeartBeat , pyrosetta.toolbox.py_jobdistributor.PyJobDistributor , sidechain_cst_3.Atom , sidechain_cst_3.Residue , test.T007_TracerIO.MyPyTracer , test.T850_SubClassing.A , test.T850_SubClassing.My_New_Mover , test.T850_SubClassing.MyNewCI1B , test.T850_SubClassing.MyNewCI1B_Creator , test.T850_SubClassing.PyOverloadTest , test.T850_SubClassing.PyValue , test.T860_SubClassing_EnergyMethods.MyCI1B_Method , test.T870_SubClassing_EnergyMethods2.CD2B_Method , test.T870_SubClassing_EnergyMethods2.CI1B_Method , test.T870_SubClassing_EnergyMethods2.CI2B_Method , test.Workshop9_my_shapes.CI2BScoreMethod , test.Workshop9_my_shapes.LengthScoreMethod , test.Workshop9_my_shapes.MyCircle , test.Workshop9_my_shapes.MyShape , test.Workshop9_my_shapes.MySquare , test.Workshop9_my_shapes.PhiNByXDegreesMover
• __iter__() : pyrosetta.bindings.pose.PoseResidueAccessor , pyrosetta.bindings.pose.PoseResidueLabelAccessor , pyrosetta.bindings.pose.PoseResidueLabelMaskAccessor , pyrosetta.bindings.pose.PoseScoreAccessor , pyrosetta.bindings.pose.ResidueLabelAccessor , pyrosetta.io.silent_file_map.SilentFileEnergyAccessor , pyrosetta.io.silent_file_map.SilentFileMap , pyrosetta.io.silent_file_map.SilentFilePoseAccessor
• __len__() : pyrosetta.bindings.pose.PoseResidueAccessor , pyrosetta.bindings.pose.PoseResidueLabelAccessor , pyrosetta.bindings.pose.PoseResidueLabelMaskAccessor , pyrosetta.bindings.pose.PoseScoreAccessor , pyrosetta.bindings.pose.ResidueLabelAccessor , pyrosetta.io.silent_file_map.SilentFileEnergyAccessor , pyrosetta.io.silent_file_map.SilentFileMap , pyrosetta.io.silent_file_map.SilentFilePoseAccessor
• __name__() : pyrosetta.distributed.tasks.taskbase.TaskBase
• __new__() : ez_setup.ContextualZipFile
• __radd__() : pyrosetta.distributed.viewer.core.Viewer
• __repr__() : arls_impl.DockingFile , pyrosetta.bindings.pose.PoseResidueLabelAccessor , pyrosetta.bindings.pose.ResidueLabelAccessor , pyrosetta.distributed.docs.ComponentDoc , pyrosetta.distributed.tasks.taskbase.TaskBase , pyrosetta.distributed.utility.log.Plog
• __reversed__() : pyrosetta.bindings.pose.PoseResidueAccessor , pyrosetta.bindings.pose.PoseResidueLabelAccessor
• __setitem__() : pyrosetta.bindings.pose.PoseScoreAccessor , pyrosetta.io.silent_file_map.SilentFileMap
• __setstate__() : pyrosetta.distributed.tasks.taskbase.TaskBase
• __str__() : arls_impl.DockingFile , PyMOL-Rosetta-relay-client.StartUpError , PyMOL-Rosetta-relay-client.XYZCoord , PyMOL-RosettaServer.StartUpError , PyMOL-RosettaServer.XYZCoord , pyrosetta.bindings.pose.PoseResidueLabelAccessor , pyrosetta.bindings.pose.PoseScoreAccessor , pyrosetta.bindings.pose.ResidueLabelAccessor , pyrosetta.distributed.docs.ComponentDoc , pyrosetta.network.rosetta_udp_to_tcp_bridge.StartUpError , pyrosetta.PyMOLRosettaServer.StartUpError , pyrosetta.PyMOLRosettaServer.XYZCoord , pyrosetta.PyRosettaException , test.Workshop9_my_shapes.MyShape , test.Workshop9_my_shapes.PhiNByXDegreesMover
• _ccache() : arls_impl.DockingCase
• _clear_output() : pyrosetta.distributed.viewer.core.Viewer
• _close_logger() : pyrosetta.distributed.cluster.logging_support.LoggingSupport
• _color_model() : PyMOL-Rosetta-relay-client.PR_PyMOLServer , PyMOL-RosettaServer.PR_PyMOLServer , pyrosetta.PyMOLRosettaServer.PR_PyMOLServer
• _component_names() : pyrosetta.distributed.docs.FilterDocs , pyrosetta.distributed.docs.InlineDocs , pyrosetta.distributed.docs.MoverDocs
• _format_result() : pyrosetta.distributed.cluster.io.IO
• _get_cluster() : pyrosetta.distributed.cluster.utilities.SchedulerManager
• _get_instance_and_metadata() : pyrosetta.distributed.cluster.io.IO
• _get_logger() : pyrosetta.distributed.utility.log.LoggerMixin
• _get_msg() : pyrosetta.distributed.cluster.exceptions.WorkerError
• _get_output_dir() : pyrosetta.distributed.cluster.io.IO
• _get_seed() : pyrosetta.distributed.cluster.base.TaskBase
• _get_task_state() : pyrosetta.distributed.cluster.base.TaskBase
• _ignore_errors_msg() : pyrosetta.distributed.cluster.exceptions.WorkerError
• _lcache() : arls_impl.DockingCase
• _maybe_adapt() : pyrosetta.distributed.cluster.utilities.SchedulerManager
• _maybe_teardown() : pyrosetta.distributed.cluster.utilities.SchedulerManager
• _msg() : pyrosetta.distributed.cluster.exceptions.WorkerError
• _parse_results() : pyrosetta.distributed.cluster.io.IO
• _pcache() : arls_impl.DockingCase
• _process_kwargs() : pyrosetta.distributed.cluster.io.IO
• _repr_pretty_() : pyrosetta.bindings.pose.PoseResidueLabelAccessor , pyrosetta.bindings.pose.PoseScoreAccessor , pyrosetta.bindings.pose.ResidueLabelAccessor , pyrosetta.distributed.docs.ComponentDoc
• _rotation_matrix() : pyrosetta.tests.numeric.test_alignment.TestAlignment
• _save_results() : pyrosetta.distributed.cluster.io.IO
• _setup_client_cluster_adaptive() : pyrosetta.distributed.cluster.utilities.SchedulerManager
• _setup_initial_kwargs() : pyrosetta.distributed.cluster.base.TaskBase
• _setup_kwargs() : pyrosetta.distributed.cluster.base.TaskBase
• _setup_logger() : pyrosetta.distributed.cluster.logging_support.LoggingSupport
• _setup_protocols_protocol_seed() : pyrosetta.distributed.cluster.base.TaskBase
• _setup_seed() : pyrosetta.distributed.cluster.base.TaskBase
• _toggle_scrolling() : pyrosetta.distributed.viewer.core.Viewer
• _toggle_window() : pyrosetta.distributed.viewer.core.Viewer
• _write_environment_file() : pyrosetta.distributed.cluster.io.IO