per_residue_metrics Directory Reference

Directory dependency graph for per_residue_metrics:

Files
file	HbondMetric.cc
	A metric to report the total h-bonds of a residue, or from a set of residues to another set of residues. Use the SummaryMetric to get total hbonds of a selection or between selections. See the WaterMediatedBridgedHBondMetric for water-mediated h-bonds.
file	HbondMetric.fwd.hh
	A metric to report the total h-bonds of a residue, or from a set of residues to another set of residues. Use the SummaryMetric to get total hbonds of a selection or between selections. See the WaterMediatedBridgedHBondMetric for water-mediated h-bonds.
file	HbondMetric.hh
	A metric to report the total h-bonds of a residue, or from a set of residues to another set of residues. Use the SummaryMetric to get total hbonds of a selection or between selections. See the WaterMediatedBridgedHBondMetric for water-mediated h-bonds.
file	PerResidueClashMetric.cc
	A SimpleMetric that calculates the number of atomic clashes per residue using the LJ radius (at 0). Can use a soft radius, which reduces it by 33%.
file	PerResidueClashMetric.fwd.hh
	A SimpleMetric that calculates the number of atomic clashes per residue using the LJ radius (at 0). Can use a soft radius, which reduces it by 33%.
file	PerResidueClashMetric.hh
	A SimpleMetric that calculates the number of atomic clashes per residue using the LJ radius (at 0).
file	PerResidueDensityFitMetric.cc
	A per-residue metric that will calculate the density fit for each residue using either a correlation or a zscore.
file	PerResidueDensityFitMetric.fwd.hh
	A per-residue metric that will calculate the density fit for each residue using either a correlation or a zscore.
file	PerResidueDensityFitMetric.hh
	A per-residue metric that will calculate the density fit for each residue using either a correlation or a zscore.
file	PerResidueEnergyMetric.cc
	A per-residue metric that will calculate/output per residue total energies or a specific score component. Correctly decomposes energies to per-residue.
file	PerResidueEnergyMetric.fwd.hh
	A per-residue metric that will calculate/output per residue total energies or a specific score component. Correctly decomposes energies to per-residue.
file	PerResidueEnergyMetric.hh
	A per-residue metric that will calculate/output per residue total energies or a specific score component. Correctly decomposes energies to per-residue.
file	PerResidueGlycanLayerMetric.cc
	A metric that outputs the layer of the glycan tree as measured by the residue distance to the root.
file	PerResidueGlycanLayerMetric.fwd.hh
	A metric that outputs the layer of the glycan tree as measured by the residue distance to the root.
file	PerResidueGlycanLayerMetric.hh
	A metric that outputs the layer of the glycan tree as measured by the residue distance to the root.
file	PerResidueRMSDMetric.cc
	A per-residue metric thtat will calculate the RMSD for each residue given in a residue selector to a reference pose.
file	PerResidueRMSDMetric.fwd.hh
	A per-residue metric thtat will calculate the RMSD for each residue given in a residue selector to a reference pose.
file	PerResidueRMSDMetric.hh
	A per-residue metric thtat will calculate the RMSD for each residue given in a residue selector to a reference pose.
file	PerResidueSasaMetric.cc
	A per-residue metric that will calculate SASA for each residue given in a selector.
file	PerResidueSasaMetric.fwd.hh
	A per-residue metric that will calculate SASA for each residue given in a selector.
file	PerResidueSasaMetric.hh
	A per-residue metric that will calculate SASA for each residue given in a selector.
file	SidechainNeighborCountMetric.cc
	A metric for calculating each sidechains neighbors based on cones. This metric uses the same core code as the LayerSelector. It can be combined with the SimpleMetricSelector to select any set of residues based on burial.
file	SidechainNeighborCountMetric.fwd.hh
	A metric for calculating each sidechains neighbors based on cones. This metric uses the same core code as the LayerSelector. It can be combined with the SimpleMetricSelector to select any set of residues based on burial.
file	SidechainNeighborCountMetric.hh
	A metric for calculating each sidechains neighbors based on cones. This metric uses the same core code as the LayerSelector. It can be combined with the SimpleMetricSelector to select any set of residues based on burial.
file	SidechainNeighborCountMetricCreator.hh
	A metric for calculating each sidechains neighbors based on cones. This metric uses the same core code as the LayerSelector. It can be combined with the SimpleMetricSelector to select any set of residues based on burial.
file	WaterMediatedHbondMetric.cc
	A metric to measure hydrogen bonds between a set of residues that are water-mediated. Depth of 1 is default where one water mediates the interface between these residues. Depth can be set. Make sure to use the -include_waters flag to have Rosetta not ignore HOH.
file	WaterMediatedHbondMetric.fwd.hh
	A metric to measure hydrogen bonds between a set of residues that are water-mediated. Depth of 1 is default where one water mediates the interface between these residues. Depth can be set. Make sure to use the -include_waters flag to have Rosetta not ignore HOH.
file	WaterMediatedHbondMetric.hh
	A metric to measure hydrogen bonds between a set of residues that are water-mediated. Depth of 1 is default where one water mediates the interface between these residues. Depth can be set. Make sure to use the -include_waters flag to have Rosetta not ignore HOH.