test_kc.cc File Reference

#include <basic/options/keys/in.OptionKeys.gen.hh>
#include <basic/options/option.hh>
#include <basic/Tracer.hh>
#include <core/conformation/Residue.hh>
#include <core/import_pose/import_pose.hh>
#include <devel/init.hh>
#include <core/pose/Pose.hh>
#include <numeric/random/random.hh>
#include <ObjexxFCL/string.functions.hh>
#include <ObjexxFCL/format.hh>
#include <numeric/kinematic_closure/bridgeObjects.hh>
#include <numeric/kinematic_closure/kinematic_closure_helpers.hh>
#include <sstream>
#include <utility/vector1.hh>
#include <utility/io/ozstream.hh>
#include <core/kinematics/Jump.hh>
#include <numeric/conversions.hh>

Typedefs
typedef numeric::xyzVector< Real >	Vec
typedef numeric::xyzMatrix< Real >	Mat
typedef utility::vector1< Size >	sizes
typedef utility::vector1< int >	ints
typedef utility::vector1< Real >	reals
typedef utility::vector1< Vec >	vecs

Functions
vector1< reals >	vecs2vv (vecs const &v)
void	test_bridgeObjects ()
void	test_kc ()
void	test_kc2 ()
int	main (int argc, char *argv[])

Variables
static basic::Tracer	TR ("test_kc")

Typedef Documentation

ints

typedef utility::vector1<int> ints

Mat

typedef numeric::xyzMatrix<Real> Mat

reals

typedef utility::vector1<Real> reals

sizes

typedef utility::vector1<Size> sizes

Vec

typedef numeric::xyzVector<Real> Vec

vecs

typedef utility::vector1<Vec> vecs

Function Documentation

main()

int main	(	int	argc,
		char *	argv[]
	)

References argv, test.T009_Exceptions::e, basic::init(), and test_kc2().

test_bridgeObjects()

void test_bridgeObjects

(

)

References atoms, numeric::kinematic_closure::bridgeObjects(), utility::io::oc::cout, basic::options::OptionKeys::out::path::db, create_a3b_hbs::i, N, run_backbone::pivots, and numeric::kinematic_closure::printMatrix().

test_kc()

void test_kc

(

)

References atoms, numeric::kinematic_closure::bridgeObjects(), numeric::kinematic_closure::chainTORS(), numeric::kinematic_closure::chainXYZ(), numeric::conversions::degrees(), ObjexxFCL::format::F(), create_a3b_hbs::i, test.T110_numeric::I, create_a3b_hbs::j, loops_kic::middle_offset, basic::options::option, option, erraser_single_res_analysis::out, run_backbone::pivots, beta_nonlocal::pose, pyrosetta.distributed.io::pose_from_file, numeric::conversions::radians(), res, in::file::s(), ObjexxFCL::string_of(), and TR.

test_kc2()

void test_kc2

(

)

References atoms, numeric::kinematic_closure::bridgeObjects(), numeric::kinematic_closure::chainTORS(), numeric::kinematic_closure::chainXYZ(), utility::io::oc::cout, basic::options::OptionKeys::out::path::db, ObjexxFCL::format::F(), create_a3b_hbs::i, test.T110_numeric::I, basic::options::option, option, erraser_single_res_analysis::out, run_backbone::pivots, beta_nonlocal::pose, pyrosetta.distributed.io::pose_from_file, in::file::s(), ObjexxFCL::string_of(), and vecs2vv().

Referenced by main().

vecs2vv()

vector1<reals> vecs2vv

(

vecs const &

v

)

References create_a3b_hbs::i, create_a3b_hbs::r, and kmeans_adaptive_kernel_density_bb_dependent_rotlib::v.

Referenced by test_kc2().

Variable Documentation

TR

basic::Tracer TR("test_kc") ( "test_kc"  )

static

Referenced by test_kc().