long_loop.cc File Reference

#include <core/pose/Pose.hh>
#include <core/io/pdb/pdb_writer.hh>
#include <core/kinematics/FoldTree.hh>
#include <core/kinematics/MoveMap.hh>
#include <protocols/loops/Loop.hh>
#include <protocols/loops/Loops.hh>
#include <protocols/loops/CCDLoopClosureMover.hh>
#include <protocols/moves/PyMOLMover.hh>
#include <devel/init.hh>
#include <basic/Tracer.hh>
#include <protocols/forge/methods/util.hh>
#include <string>
#include <core/import_pose/import_pose.hh>

Functions
LoopsOP	read_loops_from_text_file ()
void	set_all_loop_dihedrals_to_180 (pose::PoseOP pose, const Loops::LoopList &loop_list)
int	main (int argc, char *argv[])

Variables
static basic::Tracer	TR ("pilot_apps.weitzner.long_loop")

Detailed Description

Author

Brian Weitzner (brian.nosp@m..wei.nosp@m.tzner.nosp@m.@jhu.nosp@m..edu)

Function Documentation

main()

int main	(	int	argc,
		char *	argv[]
	)

References argv, basic::options::OptionKeys::loops::ccd::ccd, test.T009_Exceptions::e, fold_tree_from_loops(), basic::init(), beta_nonlocal::mm, beta_nonlocal::pose, pyrosetta.distributed.io::pose_from_file, read_loops_from_text_file(), set_all_loop_dihedrals_to_180(), and TR.

read_loops_from_text_file()

LoopsOP read_loops_from_text_file

(

)

References basic::options::OptionKeys::cluster::loops.

Referenced by main().

set_all_loop_dihedrals_to_180()

void set_all_loop_dihedrals_to_180	(	pose::PoseOP	pose,
		const Loops::LoopList &	loop_list
	)

References create_a3b_hbs::i, beta_nonlocal::pose, basic::options::OptionKeys::cutoutdomain::start, and TR.

Referenced by main().

Variable Documentation

TR

basic::Tracer TR("pilot_apps.weitzner.long_loop") ( "pilot_apps.weitzner.long_loop"  )

static

Referenced by main(), and set_all_loop_dihedrals_to_180().