membrane_pose_test.cc File Reference

Quick debugging of constructing a membrane pose (enables gdb stuff) More...

#include <core/pose/Pose.hh>
#include <devel/init.hh>
#include <core/types.hh>
#include <core/membrane/util/definitions.hh>
#include <core/membrane/util/Exceptions.hh>
#include <core/conformation/Residue.hh>
#include <core/conformation/ResidueFactory.hh>
#include <core/chemical/ResidueTypeSet.hh>
#include <core/chemical/ChemicalManager.hh>
#include <core/chemical/VariantType.hh>
#include <basic/Tracer.hh>
#include <core/membrane/geometry/MembraneResidueFactory.hh>
#include <core/membrane/geometry/EmbeddingFactory.hh>
#include <core/membrane/io/EmbedDefIO.hh>
#include <core/membrane/io/SpanFileIO.hh>
#include <core/membrane/kinematics/MembraneFoldTree.hh>
#include <core/import_pose/import_pose.hh>
#include <core/conformation/Conformation.hh>
#include <core/kinematics/FoldTree.hh>
#include <core/kinematics/Edge.hh>
#include <basic/options/option.hh>
#include <basic/options/keys/in.OptionKeys.gen.hh>
#include <utility/VirtualBase.hh>
#include <utility/string_util.hh>
#include <cstdlib>
#include <string>
#include <cmath>

Functions
int	main (int argc, char *argv[])
	Top Level Testing for Constructing Membrane Proteins. More...

Variables
static basic::Tracer	TR ("apps.pilot.ralford.membrane_pose_test")

Detailed Description

Quick debugging of constructing a membrane pose (enables gdb stuff)

(quick debug)

Author

Rebecca Alford (rfalf.nosp@m.ord1.nosp@m.2@gma.nosp@m.il.c.nosp@m.om)

Function Documentation

main()

int main	(	int	argc,
		char *	argv[]
	)

Top Level Testing for Constructing Membrane Proteins.

Runs applications with debug tracers contianing expected data. Will eventually call the new object oriented code

Main

References argv, center, basic::options::OptionKeys::chemical::chemical, utility::io::oc::cout, basic::options::OptionKeys::frags::depth, test.T020_Pose_Bindings::ft, basic::options::OptionKeys::mp::geometry, basic::init(), basic::options::OptionKeys::abinitio::membrane, normal, beta_nonlocal::pose, pyrosetta.distributed.io::pose_from_file, and TR.

Variable Documentation

TR

basic::Tracer TR("apps.pilot.ralford.membrane_pose_test") ( "apps.pilot.ralford.membrane_pose_test"  )

static

Referenced by main().