test_loop_hash.cc File Reference

#include <basic/options/option.hh>
#include <basic/options/option_macros.hh>
#include <basic/options/keys/in.OptionKeys.gen.hh>
#include <basic/options/keys/out.OptionKeys.gen.hh>
#include <core/import_pose/import_pose.hh>
#include <devel/init.hh>
#include <core/kinematics/Stub.hh>
#include <core/pose/Pose.hh>
#include <core/pose/annotated_sequence.hh>
#include <core/pose/util.hh>
#include <numeric/xyz.functions.hh>
#include <numeric/xyz.io.hh>
#include <numeric/HomogeneousTransform.hh>
#include <ObjexxFCL/format.hh>
#include <ObjexxFCL/string.functions.hh>
#include <protocols/loophash/BackboneDB.hh>
#include <protocols/loophash/LoopHashLibrary.hh>
#include <protocols/loophash/LoopHashLibrary.fwd.hh>
#include <protocols/loophash/LoopHashMap.hh>
#include <apps/pilot/will/will_util.ihh>
#include <core/kinematics/AtomTree.hh>
#include <core/kinematics/tree/Atom.hh>
#include <core/kinematics/tree/Atom_.hh>
#include <core/kinematics/tree/BondedAtom.hh>
#include <core/kinematics/tree/JumpAtom.hh>
#include <core/conformation/ResidueFactory.hh>
#include <core/chemical/ChemicalManager.hh>
#include <core/chemical/ResidueTypeSet.hh>

Macros
#define	MAX_CYS_RES   0
#define	MAX_NRES   1000

Typedefs
typedef numeric::xyzVector< core::Real >	Vec
typedef numeric::xyzMatrix< core::Real >	Mat

Functions
void	register_options ()
void	test_replicate_xform ()
void	test_lh_counts (core::pose::Pose const &pose)
int	main (int argc, char *argv[])

Macro Definition Documentation

MAX_CYS_RES

#define MAX_CYS_RES   0

MAX_NRES

#define MAX_NRES   1000

Typedef Documentation

Mat

typedef numeric::xyzMatrix<core::Real> Mat

Vec

typedef numeric::xyzVector<core::Real> Vec

Function Documentation

main()

int main	(	int	argc,
		char *	argv[]
	)

References argv, utility::io::oc::cout, test.T009_Exceptions::e, PREcst::fname, create_a3b_hbs::i, basic::init(), subloop_histogram::iterator, loop_hash_library, basic::options::OptionKeys::lh::loopsizes, basic::options::OptionKeys::AnchoredDesign::filters::omega, basic::options::option, oop_conformations::phi, beta_nonlocal::pose, pyrosetta.distributed.io::pose_from_file, oop_conformations::psi, basic::options::OptionKeys::cluster::radius, register_options(), basic::options::OptionKeys::in::file::s, and str().

register_options()

void register_options

(

)

References basic::options::OptionKeys::frags::contacts::min_seq_sep, NEW_OPT, and pna::test_score.

Referenced by main().

test_lh_counts()

void test_lh_counts

(

core::pose::Pose const &

pose

)

References utility::io::oc::cout, create_a3b_hbs::i, loop_hash_library, basic::options::OptionKeys::lh::loopsizes, beta_nonlocal::pose, and utility_exit_with_message.

test_replicate_xform()

void test_replicate_xform

(

)

References utility::io::oc::cout, create_a3b_hbs::i, basic::options::option, beta_nonlocal::pose, pyrosetta.distributed.io::pose_from_file, and basic::options::OptionKeys::in::file::s.