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mikejd2test.cc File Reference
#include <protocols/jobdist/JobDistributors.hh>
#include <protocols/jobdist/Jobs.hh>
#include <protocols/jd2/Job.hh>
#include <core/kinematics/util.hh>
#include <protocols/moves/Mover.hh>
#include <protocols/moves/MoverContainer.hh>
#include <protocols/abinitio/FragmentMover.hh>
#include <protocols/abinitio/SmoothFragmentMover.hh>
#include <protocols/abinitio/GunnCost.hh>
#include <protocols/relax/util.hh>
#include <protocols/abinitio/AbrelaxMover.hh>
#include <protocols/jumping/SecondaryStructure.hh>
#include <core/types.hh>
#include <core/pose/Pose.hh>
#include <core/pose/util.hh>
#include <devel/init.hh>
#include <basic/MetricValue.hh>
#include <basic/options/option.hh>
#include <basic/options/keys/abinitio.OptionKeys.gen.hh>
#include <basic/options/keys/constraints.OptionKeys.gen.hh>
#include <basic/options/keys/evaluation.OptionKeys.gen.hh>
#include <basic/options/keys/filters.OptionKeys.gen.hh>
#include <basic/options/keys/frags.OptionKeys.gen.hh>
#include <basic/options/keys/in.OptionKeys.gen.hh>
#include <basic/options/keys/jumps.OptionKeys.gen.hh>
#include <basic/options/keys/loopfcst.OptionKeys.gen.hh>
#include <basic/options/keys/loops.OptionKeys.gen.hh>
#include <basic/options/keys/out.OptionKeys.gen.hh>
#include <basic/options/keys/run.OptionKeys.gen.hh>
#include <basic/options/keys/templates.OptionKeys.gen.hh>
#include <basic/options/after_opts.hh>
#include <basic/options/option_macros.hh>
#include <core/fragment/ConstantLengthFragSet.hh>
#include <core/fragment/BBTorsionSRFD.hh>
#include <core/fragment/util.hh>
#include <core/fragment/FragmentIO.hh>
#include <core/chemical/ChemicalManager.hh>
#include <core/conformation/util.hh>
#include <core/io/silent/SilentFileData.hh>
#include <core/scoring/constraints/ConstraintSet.hh>
#include <core/scoring/constraints/ConstraintIO.hh>
#include <core/scoring/constraints/util.hh>
#include <core/scoring/constraints/NamedAtomPairConstraint.hh>
#include <core/scoring/ScoreFunction.fwd.hh>
#include <core/scoring/ScoreType.hh>
#include <core/scoring/ScoreFunctionFactory.hh>
#include <core/scoring/rms_util.hh>
#include <core/scoring/constraints/BoundConstraint.hh>
#include <protocols/pose_metric_calculators/ClashCountCalculator.hh>
#include <core/io/pdb/pdb_writer.hh>
#include <core/io/silent/silent.fwd.hh>
#include <core/io/silent/SilentStructFactory.hh>
#include <core/sequence/util.hh>
#include <protocols/evaluation/PoseEvaluator.hh>
#include <protocols/evaluation/RmsdEvaluator.hh>
#include <protocols/evaluation/JumpEvaluator.hh>
#include <protocols/evaluation/TimeEvaluator.hh>
#include <protocols/evaluation/PCA.hh>
#include <protocols/evaluation/PoseMetricEvaluator.hh>
#include <protocols/evaluation/ConstraintEvaluator.hh>
#include <protocols/evaluation/util.hh>
#include <protocols/evaluation/ChemicalShiftEvaluator.hh>
#include <protocols/loops/SlidingWindowLoopClosure.hh>
#include <protocols/loops/WidthFirstSlidingWindowLoopClosure.hh>
#include <protocols/loops/Loops.hh>
#include <protocols/loops/LoopMover.hh>
#include <protocols/loops/util.hh>
#include <protocols/idealize.hh>
#include <protocols/filters/Filter.hh>
#include <protocols/simple_filters/RGFilter.hh>
#include <protocols/simple_filters/COFilter.hh>
#include <protocols/simple_filters/SheetFilter.hh>
#include <protocols/jd2/JobDistributor.hh>
#include <protocols/jd2/JobOutputter.hh>
#include <protocols/moves/MoverStatus.hh>
#include <numeric/random/random.hh>
#include <utility/io/izstream.hh>
#include <utility/vector1.hh>
#include <basic/Tracer.hh>
#include <utility/io/util.hh>
#include <utility/exit.hh>
#include <utility/excn/Exceptions.hh>
#include <cstdlib>
#include <string>
#include <vector>
#include <protocols/topology_broker/TopologyBroker.hh>
#include <protocols/topology_broker/util.hh>
#include <protocols/topology_broker/FragmentClaimer.hh>
#include <protocols/topology_broker/JumpClaimer.hh>
#include <protocols/topology_broker/SequenceClaimer.hh>
#include <protocols/topology_broker/RigidChunkClaimer.hh>
#include <protocols/topology_broker/ConstraintClaimer.hh>
#include <protocols/topology_broker/LoopFragmentClaimer.hh>
#include <protocols/topology_broker/CutBiasClaimer.hh>
#include <protocols/abinitio/FragmentSampler.hh>
#include <protocols/abinitio/ConstraintFragmentSampler.hh>

Classes

class  TestJD2Mover
 

Typedefs

typedef utility::pointer::owning_ptr< TestJD2MoverTestJD2MoverOP
 
typedef utility::pointer::owning_ptr< TestJD2Mover const > TestJD2MoverCOP
 

Functions

void run ()
 
int main (int argc, char *argv[])
 =============================== MAIN ============================================================ More...
 

Typedef Documentation

◆ TestJD2MoverCOP

typedef utility::pointer::owning_ptr< TestJD2Mover const > TestJD2MoverCOP

◆ TestJD2MoverOP

typedef utility::pointer::owning_ptr< TestJD2Mover > TestJD2MoverOP

Function Documentation

◆ main()

int main ( int  argc,
char *  argv[] 
)

=============================== MAIN ============================================================

References argv, test.T009_Exceptions::e, basic::init(), and run().

◆ run()

void run ( )