IAMover Class Reference

Inheritance diagram for IAMover:

Public Member Functions
	IAMover ()
virtual void	apply (core::pose::Pose &pose)
	begin apply More...
virtual std::string	get_name () const
virtual void	assign_IA_mover (devel::anchored_design::InterfaceAnalyzerMoverOP &moverOP, core::pose::Pose &pose)
	IAMover ()
	~IAMover () override=default
void	apply (core::pose::Pose &pose) override
std::string	get_name () const override
bool	reinitialize_for_each_job () const override
bool	reinitialize_for_new_input () const override
protocols::moves::MoverOP	fresh_instance () const override
void	assign_IA_mover (core::pose::Pose &pose)

Private Attributes
std::string	output_name_
utility::io::ozstream	output_statsFile_
devel::anchored_design::InterfaceAnalyzerMoverOP	IAM_
core::scoring::ScoreFunctionOP	scorefxn_
const char *	name_star_
protocols::analysis::InterfaceAnalyzerMoverOP	IAM_

Constructor & Destructor Documentation

IAMover() [1/2]

IAMover::IAMover

(

)

References ia_stats_filename, name_star_, basic::options::option, output_name_, and scorefxn_.

IAMover() [2/2]

IAMover::IAMover

(

)

~IAMover()

IAMover::~IAMover ( )

overridedefault

Member Function Documentation

apply() [1/2]

void IAMover::apply ( core::pose::Pose &  pose )

virtual

begin apply

References spectral_cluster_kmeans_adaptive_kernel_density_bb_dependent_rotlib::A, assign_IA_mover(), ObjexxFCL::format::F(), utility::file::file_exists(), lactamize::filename, force_output, test.T110_numeric::I, IAM_, name_star_, utility::io::ozstream::open(), utility::io::ozstream::open_append(), basic::options::option, output_filename, output_name_, output_statsFile_, predPRE::pdbname, beta_nonlocal::pose, TR, utility_exit_with_message_status, value, write_pymol_selections_to_file, and write_pymol_selections_to_tracer.

Referenced by pyrosetta.distributed.tasks.rosetta_scripts.BaseRosettaScriptsTask::execute().

apply() [2/2]

void IAMover::apply ( core::pose::Pose &  pose )

override

Referenced by pyrosetta.distributed.tasks.rosetta_scripts.BaseRosettaScriptsTask::execute().

assign_IA_mover() [1/2]

void IAMover::assign_IA_mover

(

core::pose::Pose &

pose

)

References compute_interface_sc, compute_packstat, fixedchains, create_a3b_hbs::i, IAM_, interface, create_a3b_hbs::j, basic::options::OptionKeys::lh::jobname, jumpnum, num_chains(), basic::options::option, pack_input, pack_separated, beta_nonlocal::pose, scorefxn_, TR, tracer, tracer_data_print, use_jobname, utility_exit_with_message, and value.

assign_IA_mover() [2/2]

void IAMover::assign_IA_mover ( devel::anchored_design::InterfaceAnalyzerMoverOP &  moverOP, core::pose::Pose &  pose  )

virtual

References compute_packstat, fixedchains, create_a3b_hbs::i, create_a3b_hbs::j, jumpnum, basic::options::option, pack_input, beta_nonlocal::pose, TR, tracer_data_print, utility_exit_with_message_status, and value.

Referenced by apply().

fresh_instance()

protocols::moves::MoverOP IAMover::fresh_instance ( ) const

inlineoverride

get_name() [1/2]

virtual std::string IAMover::get_name ( ) const

inlinevirtual

get_name() [2/2]

std::string IAMover::get_name ( ) const

inlineoverride

reinitialize_for_each_job()

bool IAMover::reinitialize_for_each_job ( ) const

inlineoverride

reinitialize_for_new_input()

bool IAMover::reinitialize_for_new_input ( ) const

inlineoverride

Member Data Documentation

IAM_ [1/2]

devel::anchored_design::InterfaceAnalyzerMoverOP IAMover::IAM_

private

Referenced by apply(), and assign_IA_mover().

IAM_ [2/2]

protocols::analysis::InterfaceAnalyzerMoverOP IAMover::IAM_

private

name_star_

const char* IAMover::name_star_

private

Referenced by apply(), and IAMover().

output_name_

std::string IAMover::output_name_

private

Referenced by apply(), and IAMover().

output_statsFile_

utility::io::ozstream IAMover::output_statsFile_

private

Referenced by apply().

scorefxn_

core::scoring::ScoreFunctionOP IAMover::scorefxn_

private

Referenced by assign_IA_mover(), and IAMover().

---

The documentation for this class was generated from the following files:

• src/apps/pilot/stranges/simple_interfaceanalyzer.cc
• src/apps/public/analysis/InterfaceAnalyzer.cc