DistanceMatrix Class Reference

#include <james_util.hh>

Inheritance diagram for DistanceMatrix:

Public Member Functions
	DistanceMatrix (core::pose::Pose const &pose, std::string const &atom_name)
void	calculate_distances (core::pose::Pose const &pose)
std::string	atom_name () const
core::Real	distance (core::Size const ii, core::Size const jj) const
Public Member Functions inherited from utility::VirtualBase
	VirtualBase ()=default
	Default constructor. More...
virtual	~VirtualBase ()=default
	The virtual destructor is one of the main reasons for the VirtualBase class. More...
	VirtualBase (VirtualBase const &)=default
	VirtualBase (VirtualBase &&)=default
VirtualBase &	operator= (VirtualBase const &)=default
VirtualBase &	operator= (VirtualBase &&)=default

Private Attributes
std::string	atom_name_
utility::vector1< utility::vector1< core::Real > >	distances_

Constructor & Destructor Documentation

DistanceMatrix()

DistanceMatrix::DistanceMatrix ( core::pose::Pose const &  pose, std::string const &  atom_name  )

inline

References calculate_distances(), and beta_nonlocal::pose.

Member Function Documentation

atom_name()

std::string DistanceMatrix::atom_name ( ) const

inline

References atom_name_.

Referenced by calculate_distances().

calculate_distances()

void DistanceMatrix::calculate_distances ( core::pose::Pose const &  pose )

inline

References atom_name(), dist(), distances_, create_a3b_hbs::ii, beta_nonlocal::jj, and beta_nonlocal::pose.

Referenced by DistanceMatrix().

distance()

core::Real DistanceMatrix::distance ( core::Size const  ii, core::Size const  jj  ) const

inline

References distances_, create_a3b_hbs::ii, and beta_nonlocal::jj.

Referenced by main().

Member Data Documentation

atom_name_

std::string DistanceMatrix::atom_name_

private

Referenced by atom_name().

distances_

utility::vector1< utility::vector1< core::Real > > DistanceMatrix::distances_

private

Referenced by calculate_distances(), and distance().

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The documentation for this class was generated from the following file:

• src/apps/pilot/james/james_util.hh