CalcIrms Class Reference

Inheritance diagram for CalcIrms:

Public Member Functions
	CalcIrms ()
	~CalcIrms () override=default
void	apply (core::pose::Pose &model_pose) override
std::string	get_name () const override
protocols::moves::MoverOP	fresh_instance () const override
bool	reinitialize_for_each_job () const override
bool	reinitialize_for_new_input () const override
void	setup_native ()

Private Attributes
core::pose::Pose	native_pose_
ObjexxFCL::FArray1D_bool	is_native_interface_
ObjexxFCL::FArray1D_bool	is_aln_chain_
core::scoring::ScoreFunctionOP	scorefxn_
std::string	aln_chain_
core::Size	interface_jump_

Constructor & Destructor Documentation

CalcIrms()

CalcIrms::CalcIrms ( )

inline

References basic::options::option, basic::options::OptionKeys::inout::dbms::user, and utility_exit_with_message.

~CalcIrms()

CalcIrms::~CalcIrms ( )

overridedefault

Member Function Documentation

apply()

void CalcIrms::apply ( core::pose::Pose &  model_pose )

inlineoverride

References create_a3b_hbs::i, bin_torsions::job, beta_nonlocal::pose, basic::options::OptionKeys::frags::scoring::scoring, and TR.

Referenced by pyrosetta.distributed.tasks.rosetta_scripts.BaseRosettaScriptsTask::execute().

fresh_instance()

protocols::moves::MoverOP CalcIrms::fresh_instance ( ) const

inlineoverride

get_name()

std::string CalcIrms::get_name ( ) const

inlineoverride

reinitialize_for_each_job()

bool CalcIrms::reinitialize_for_each_job ( ) const

inlineoverride

reinitialize_for_new_input()

bool CalcIrms::reinitialize_for_new_input ( ) const

inlineoverride

setup_native()

void CalcIrms::setup_native ( )

inline

References create_a3b_hbs::i, interface, surface_app::native, option, beta_nonlocal::pose, pyrosetta.distributed.io::pose_from_file, basic::options::OptionKeys::frags::scoring::scoring, and TR.

Member Data Documentation

aln_chain_

std::string CalcIrms::aln_chain_

private

interface_jump_

core::Size CalcIrms::interface_jump_

private

is_aln_chain_

ObjexxFCL::FArray1D_bool CalcIrms::is_aln_chain_

private

is_native_interface_

ObjexxFCL::FArray1D_bool CalcIrms::is_native_interface_

private

native_pose_

core::pose::Pose CalcIrms::native_pose_

private

scorefxn_

core::scoring::ScoreFunctionOP CalcIrms::scorefxn_

private

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The documentation for this class was generated from the following file:

• src/apps/pilot/jeliazkov/calc_irms_despite_mismatch.cc