TwoChainInterface Class Reference

Public Member Functions
	TwoChainInterface ()
	TwoChainInterface (pose::Pose &, Size const, Size const)
	TwoChainInterface (pose::Pose &, char const, char const)
std::pair< utility::vector1< Size >, utility::vector1< Size > >	interface ()

Private Member Functions
void	get_chain_terminii_ (pose::Pose const &pose, Size const chain1_id, Size const chain2_id)
Size	chain_letter_to_number (pose::Pose const &pose, char const chain_id)
void	find_interface (pose::Pose &pose, char const chain1_id, char const chain2_id)
void	find_interface (pose::Pose &pose, Size const chain1_id, Size const chain2_id)

Private Attributes
Size	chain1_number_
Size	chain2_number_
char	chain1_letter_
char	chain2_letter_
Size	ch1_begin_
Size	ch1_end_
Size	ch2_begin_
Size	ch2_end_
Size	partner1_res_
Size	partner2_res_
utility::vector1< Size >	chain1_interface_
utility::vector1< Size >	chain2_interface_
utility::vector1< Size >::iterator	size_iter_
std::pair< utility::vector1< Size >, utility::vector1< Size > >	list_interface_

Constructor & Destructor Documentation

TwoChainInterface() [1/3]

TwoChainInterface::TwoChainInterface

(

)

TwoChainInterface() [2/3]

TwoChainInterface::TwoChainInterface	(	pose::Pose &	pose,
		Size const	chain1_id,
		Size const	chain2_id
	)

References beta_nonlocal::pose.

TwoChainInterface() [3/3]

TwoChainInterface::TwoChainInterface	(	pose::Pose &	pose,
		char const	chain1_id,
		char const	chain2_id
	)

References beta_nonlocal::pose.

Member Function Documentation

chain_letter_to_number()

Size TwoChainInterface::chain_letter_to_number ( pose::Pose const &  pose, char const  chain_id  )

inlineprivate

References create_a3b_hbs::i, and beta_nonlocal::pose.

find_interface() [1/2]

void TwoChainInterface::find_interface ( pose::Pose &  pose, char const  chain1_id, char const  chain2_id  )

inlineprivate

References beta_nonlocal::pose.

find_interface() [2/2]

void TwoChainInterface::find_interface ( pose::Pose &  pose, Size const  chain1_id, Size const  chain2_id  )

inlineprivate

References utility::graph::Node::const_upper_edge_list_end(), utility::graph::Edge::get_node(), and beta_nonlocal::pose.

get_chain_terminii_()

void TwoChainInterface::get_chain_terminii_ ( pose::Pose const &  pose, Size const  chain1_id, Size const  chain2_id  )

inlineprivate

References beta_nonlocal::pose.

interface()

std::pair< utility::vector1<Size>, utility::vector1<Size> > TwoChainInterface::interface ( )

inline

Member Data Documentation

ch1_begin_

Size TwoChainInterface::ch1_begin_

private

ch1_end_

Size TwoChainInterface::ch1_end_

private

ch2_begin_

Size TwoChainInterface::ch2_begin_

private

ch2_end_

Size TwoChainInterface::ch2_end_

private

chain1_interface_

utility::vector1< Size > TwoChainInterface::chain1_interface_

private

chain1_letter_

char TwoChainInterface::chain1_letter_

private

chain1_number_

Size TwoChainInterface::chain1_number_

private

chain2_interface_

utility::vector1< Size > TwoChainInterface::chain2_interface_

private

chain2_letter_

char TwoChainInterface::chain2_letter_

private

chain2_number_

Size TwoChainInterface::chain2_number_

private

list_interface_

std::pair< utility::vector1<Size>, utility::vector1<Size> > TwoChainInterface::list_interface_

private

partner1_res_

Size TwoChainInterface::partner1_res_

private

partner2_res_

Size TwoChainInterface::partner2_res_

private

size_iter_

utility::vector1< Size >::iterator TwoChainInterface::size_iter_

private

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The documentation for this class was generated from the following file:

• src/apps/pilot/jcorn/TwoChainInterface.cc