check_burial.cc File Reference

#include <core/types.hh>
#include <core/pose/Pose.hh>
#include <core/pose/Pose.fwd.hh>
#include <basic/options/option.hh>
#include <devel/init.hh>
#include <fstream>
#include <iostream>
#include <string>
#include <basic/options/keys/in.OptionKeys.gen.hh>
#include <core/conformation/Residue.hh>
#include <core/import_pose/import_pose.hh>
#include <ObjexxFCL/format.hh>
#include <utility/excn/Exceptions.hh>

Functions
utility::vector1< int >	calculate_burial (core::pose::Pose mypose)
int	main (int argc, char *argv[])

Detailed Description

Author

James Thompson

Function Documentation

calculate_burial()

utility::vector1< int > calculate_burial

(

core::pose::Pose

mypose

)

References basic::options::OptionKeys::in::file::burial, create_a3b_hbs::i, create_a3b_hbs::j, pna::resi, and basic::options::OptionKeys::cmiles::jumping::resj.

Referenced by main().

main()

int main	(	int	argc,
		char *	argv[]
	)

References ObjexxFCL::format::A(), argv, basic::options::OptionKeys::in::file::burial, calculate_burial(), utility::io::oc::cerr, test.T009_Exceptions::e, create_a3b_hbs::i, ObjexxFCL::format::I(), basic::init(), kmeans_adaptive_kernel_density_bb_dependent_rotlib::m, option, lactamize::outfile, bin_torsions::output, clean_pdb_keep_ligand::pdbfile, pyrosetta.distributed.io::pose_from_file, pna::resi, in::file::s(), and utility_exit_with_message.