#include <basic/options/option.hh>
#include <basic/options/option_macros.hh>
#include <basic/options/keys/in.OptionKeys.gen.hh>
#include <basic/options/keys/out.OptionKeys.gen.hh>
#include <core/chemical/AtomType.hh>
#include <core/conformation/symmetry/util.hh>
#include <core/import_pose/import_pose.hh>
#include <devel/init.hh>
#include <core/io/silent/SilentFileData.hh>
#include <core/kinematics/Stub.hh>
#include <core/pose/Pose.hh>
#include <core/pose/annotated_sequence.hh>
#include <core/pose/util.hh>
#include <core/scoring/dssp/Dssp.hh>
#include <core/scoring/ScoreFunction.hh>
#include <core/scoring/ScoreFunctionFactory.hh>
#include <core/scoring/symmetry/SymmetricScoreFunction.hh>
#include <core/scoring/packing/compute_holes_score.hh>
#include <numeric/conversions.hh>
#include <numeric/model_quality/rms.hh>
#include <numeric/random/random.hh>
#include <numeric/xyz.functions.hh>
#include <numeric/xyz.io.hh>
#include <ObjexxFCL/FArray2D.hh>
#include <ObjexxFCL/format.hh>
#include <ObjexxFCL/string.functions.hh>
#include <utility/io/izstream.hh>
#include <utility/io/ozstream.hh>
#include <protocols/sic_dock/designability_score.hh>

Macros
#define	MAX_CYS_RES 0

#define	MAX_NRES 1000

Typedefs
typedef numeric::xyzVector< core::Real >	Vec

typedef numeric::xyzMatrix< core::Real >	Mat

Functions
void	register_options ()

void	collect_stats (core::pose::Pose &pose, std::string tag)

int	main (int argc, char *argv[])

Macro Definition Documentation

◆ MAX_CYS_RES

#define MAX_CYS_RES 0

◆ MAX_NRES

#define MAX_NRES 1000

Typedef Documentation

◆ Mat

typedef numeric::xyzMatrix<core::Real> Mat

◆ Vec

typedef numeric::xyzVector<core::Real> Vec

Function Documentation

◆ collect_stats()

void collect_stats	(	core::pose::Pose &	pose,
		std::string	tag
	)

References orn_macrocycle::ala, utility::io::oc::cout, numeric::xyzVector< T >::distance_squared(), 3d_histogram::dx, 3d_histogram::dy, 3d_histogram::dz, basic::options::OptionKeys::frags::contacts::min_seq_sep, basic::options::option, beta_nonlocal::pose, and tag.

Referenced by main().

◆ main()

int main	(	int	argc,
		char *	argv[]
	)

References argv, utility::io::oc::cerr, collect_stats(), count, utility::io::oc::cout, numeric::xyzVector< T >::distance_squared(), basic::options::OptionKeys::in::file::dssp, 3d_histogram::dx, 3d_histogram::dy, 3d_histogram::dz, test.T009_Exceptions::e, utility::file_basename(), kmeans_adaptive_kernel_density_bb_dependent_rotlib::fn, 3d_histogram::hist, create_a3b_hbs::i, kmeans_adaptive_kernel_density_bb_dependent_rotlib::idx, basic::options::OptionKeys::in::in, basic::init(), create_a3b_hbs::j, create_a3b_hbs::k, extract_by_sidechain_sasa_score::l, kmeans_adaptive_kernel_density_bb_dependent_rotlib::m, MAX_CYS_RES, MAX_NRES, kmeans_adaptive_kernel_density_bb_dependent_rotlib::n, basic::options::option, erraser_single_res_analysis::out, kmeans_adaptive_kernel_density_bb_dependent_rotlib::p, numeric::constants::f::pi_2, numeric::constants::d::pi_2, beta_nonlocal::pose, pyrosetta.distributed.io::pose_from_file, docking::R, register_options(), rotx(), roty(), rotz(), basic::options::OptionKeys::in::file::s, subloop_histogram::size, pna::test_score, basic::options::OptionKeys::inout::dbms::user, utility_exit_with_message, numeric::x_rotation_matrix_degrees(), numeric::y_rotation_matrix_degrees(), and numeric::z_rotation_matrix_degrees().

◆ register_options()

void register_options ( )

References basic::options::OptionKeys::frags::contacts::min_seq_sep, NEW_OPT, and pna::test_score.