Referenced by calculate_theoretical_RNA_length(), calculate_theoretical_RNA_length_with_bond_angle_dependence(), cluster_rotamers(), dinucleotide_test(), double_helix_test(), get_bin_size(), helix_ST(), main(), numeric::interpolation::make_spline(), modeler_closure_test(), modeler_map_test(), one_chain_MC_sampling(), one_chain_ST_MC(), output_torsion_list(), sample_new_base_in_two_base_pair_pose(), score2bin(), numeric::interpolation::spline_from_file(), and numeric::interpolation::spline_from_stream().