multimodel_gdt.cc File Reference

#include <devel/init.hh>
#include <core/types.hh>
#include <core/pose/Pose.hh>
#include <core/pose/PDBInfo.hh>
#include <core/pose/util.hh>
#include <core/import_pose/import_pose.hh>
#include <core/chemical/ChemicalManager.hh>
#include <basic/options/option.hh>
#include <basic/options/option_macros.hh>
#include <basic/options/keys/OptionKeys.hh>
#include <basic/options/keys/in.OptionKeys.gen.hh>
#include <protocols/comparative_modeling/hybridize/TMalign.hh>
#include <protocols/comparative_modeling/hybridize/util.hh>
#include <utility/vector1.hh>
#include <utility/excn/Exceptions.hh>

Functions
void	superimpose_tmalign (core::pose::Pose const &ref_pose, core::pose::Pose &pose)
void	multimodel_gdt (core::pose::Pose const &ref_pose, utility::vector1< core::pose::Pose > const &models)
int	main (int argc, char *argv[])

Function Documentation

main()

int main	(	int	argc,
		char *	argv[]
	)

References argv, test.T009_Exceptions::e, create_a3b_hbs::i, basic::init(), closure_error::models, multimodel_gdt(), surface_app::native, basic::options::OptionKeys::in::file::native, basic::options::option, pyrosetta.distributed.io::pose_from_file, pyrosetta.io::poses_from_files(), basic::options::OptionKeys::in::file::s, and superimpose_tmalign().

multimodel_gdt()

void multimodel_gdt	(	core::pose::Pose const &	ref_pose,
		utility::vector1< core::pose::Pose > const &	models
	)

References utility::io::oc::cout, create_a3b_hbs::i, create_a3b_hbs::j, oop_conformations::length, min(), closure_error::models, kmeans_adaptive_kernel_density_bb_dependent_rotlib::n, basic::options::OptionKeys::mp::mutate_relax::nmodels, create_a3b_hbs::nres, basic::options::OptionKeys::motifs::r1, and basic::options::OptionKeys::motifs::r2.

Referenced by main().

superimpose_tmalign()

void superimpose_tmalign	(	core::pose::Pose const &	ref_pose,
		core::pose::Pose &	pose
	)

References create_a3b_hbs::i, kmeans_adaptive_kernel_density_bb_dependent_rotlib::n, create_a3b_hbs::nres, and beta_nonlocal::pose.

Referenced by main().