Foldptn Class Reference

local mover for testing purposes More...

Inheritance diagram for Foldptn:

Public Types
using	BluePrint = protocols::parser::BluePrint
using	BluePrintOP = protocols::parser::BluePrintOP
using	SS_Info2 = protocols::fldsgn::topology::SS_Info2
using	SS_Info2_OP = protocols::fldsgn::topology::SS_Info2_OP
using	StrandPairingSet = protocols::fldsgn::topology::StrandPairingSet
using	StrandPairingSetOP = protocols::fldsgn::topology::StrandPairingSetOP
using	SheetSet = protocols::fldsgn::topology::SheetSet
using	SheetSetOP = protocols::fldsgn::topology::SheetSetOP
using	SheetFoldType = protocols::fldsgn::topology::SheetFoldType
using	SheetFoldTypeManager = protocols::fldsgn::topology::SheetFoldTypeManager
using	BetaAlphaBetaMotif = protocols::fldsgn::topology::BetaAlphaBetaMotif
using	BetaAlphaBetaMotifs = protocols::fldsgn::topology::BetaAlphaBetaMotifs
using	BetaAlphaBetaMotifSet = protocols::fldsgn::topology::BetaAlphaBetaMotifSet

Public Member Functions
	Foldptn ()
	~Foldptn () override=default
std::string	get_name () const override
protocols::moves::MoverOP	fresh_instance () const override
void	apply (core::pose::Pose &pose) override

Private Attributes
SheetFoldTypeManager	sm_
protocols::fldsgn::topology::SS_Info2_OP	ssinfo_
core::scoring::ScoreFunctionOP	scorefxn_fullatom_
core::scoring::ScoreFunctionOP	scorefxn_centroid_
std::ofstream	output_
std::ofstream	output2_
bool	ssinput_
core::pose::Pose	native_

Detailed Description

local mover for testing purposes

Member Typedef Documentation

BetaAlphaBetaMotif

using Foldptn::BetaAlphaBetaMotif = protocols::fldsgn::topology::BetaAlphaBetaMotif

BetaAlphaBetaMotifs

using Foldptn::BetaAlphaBetaMotifs = protocols::fldsgn::topology::BetaAlphaBetaMotifs

BetaAlphaBetaMotifSet

using Foldptn::BetaAlphaBetaMotifSet = protocols::fldsgn::topology::BetaAlphaBetaMotifSet

BluePrint

using Foldptn::BluePrint = protocols::parser::BluePrint

BluePrintOP

using Foldptn::BluePrintOP = protocols::parser::BluePrintOP

SheetFoldType

using Foldptn::SheetFoldType = protocols::fldsgn::topology::SheetFoldType

SheetFoldTypeManager

using Foldptn::SheetFoldTypeManager = protocols::fldsgn::topology::SheetFoldTypeManager

SheetSet

using Foldptn::SheetSet = protocols::fldsgn::topology::SheetSet

SheetSetOP

using Foldptn::SheetSetOP = protocols::fldsgn::topology::SheetSetOP

SS_Info2

using Foldptn::SS_Info2 = protocols::fldsgn::topology::SS_Info2

SS_Info2_OP

using Foldptn::SS_Info2_OP = protocols::fldsgn::topology::SS_Info2_OP

StrandPairingSet

using Foldptn::StrandPairingSet = protocols::fldsgn::topology::StrandPairingSet

StrandPairingSetOP

using Foldptn::StrandPairingSetOP = protocols::fldsgn::topology::StrandPairingSetOP

Constructor & Destructor Documentation

Foldptn()

Foldptn::Foldptn ( )

inline

References blue, basic::options::OptionKeys::flxbb::blueprint, pyrosetta::create_score_function, lactamize::filename, header(), basic::options::OptionKeys::in::file::native, in::file::native(), option, erraser_single_res_analysis::out, bin_torsions::output, pyrosetta.distributed.io::pose_from_file, and basic::options::OptionKeys::inout::dbms::user.

~Foldptn()

Foldptn::~Foldptn ( )

overridedefault

Member Function Documentation

apply()

void Foldptn::apply ( core::pose::Pose &  pose )

inlineoverride

References basic::options::OptionKeys::in::file::dssp, basic::options::OptionKeys::inout::inout, in::file::native(), option, localrmsd::output_name, beta_nonlocal::pose, loops_kic::rms, and basic::options::OptionKeys::inout::dbms::user.

Referenced by pyrosetta.distributed.tasks.rosetta_scripts.BaseRosettaScriptsTask::execute().

fresh_instance()

protocols::moves::MoverOP Foldptn::fresh_instance ( ) const

inlineoverride

get_name()

std::string Foldptn::get_name ( ) const

inlineoverride

Member Data Documentation

native_

core::pose::Pose Foldptn::native_

private

output2_

std::ofstream Foldptn::output2_

private

output_

std::ofstream Foldptn::output_

private

scorefxn_centroid_

core::scoring::ScoreFunctionOP Foldptn::scorefxn_centroid_

private

scorefxn_fullatom_

core::scoring::ScoreFunctionOP Foldptn::scorefxn_fullatom_

private

sm_

SheetFoldTypeManager Foldptn::sm_

private

ssinfo_

protocols::fldsgn::topology::SS_Info2_OP Foldptn::ssinfo_

private

ssinput_

bool Foldptn::ssinput_

private

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The documentation for this class was generated from the following file:

• src/apps/pilot/nobuyasu/foldptn.cc