AlanineScanner.cc File Reference

#include <core/pose/Pose.hh>
#include <core/pose/util.hh>
#include <core/io/pdb/pdb_writer.hh>
#include <core/pack/task/TaskFactory.hh>
#include <core/pack/task/PackerTask.hh>
#include <protocols/loops/LoopClass.hh>
#include <core/scoring/ScoreFunction.hh>
#include <core/scoring/ScoreFunctionFactory.hh>
#include <basic/MetricValue.hh>
#include <core/pose/metrics/CalculatorFactory.hh>
#include <core/pose/metrics/simple_calculators/InterfaceNeighborDefinitionCalculator.hh>
#include <core/pose/metrics/simple_calculators/InterfaceSasaDefinitionCalculator.hh>
#include <core/pose/metrics/simple_calculators/InterfaceDeltaEnergeticsCalculator.hh>
#include <core/chemical/ChemicalManager.hh>
#include <core/chemical/ResidueTypeSet.hh>
#include <core/chemical/ResidueType.hh>
#include <devel/init.hh>
#include <basic/options/util.hh>
#include <basic/options/option.hh>
#include <basic/Tracer.hh>
#include <utility/exit.hh>
#include <basic/prof.hh>
#include <ObjexxFCL/string.functions.hh>
#include <iostream>
#include <string>
#include <basic/options/keys/loops.OptionKeys.gen.hh>
#include <core/import_pose/import_pose.hh>

Namespaces
	local

Functions
void	register_metrics ()
int	main (int argc, char *argv[])

Variables
static basic::Tracer	TR ("apps.pilot.smlewis.AlanineScanner")
basic::options::IntegerOptionKey const	local::chain1 ("local::chain1")
basic::options::IntegerOptionKey const	local::chain2 ("local::chain2")

Function Documentation

main()

int main	(	int	argc,
		char *	argv[]
	)

References ALA, argv, local::chain1, local::chain2, create_a3b_hbs::i, basic::init(), basic::options::OptionKeys::loops::loop_file, basic::options::OptionKeys::cluster::loops, basic::options::option, option, kic_runner::pdb, pdbs, beta_nonlocal::pose, pyrosetta.distributed.io::pose_from_file, basic::prof_reset(), basic::prof_show(), register_metrics(), basic::options::OptionKeys::in::file::residue_type_set, ObjexxFCL::right_string_of(), beta_nonlocal::score_fxn, basic::options::start_files(), pyrosetta.distributed.cluster.exceptions::T, TR, basic::MetricValue< T >::value(), and value.

register_metrics()

void register_metrics

(

)

References local::chain1, local::chain2, basic::options::option, TR, and value.

Referenced by main().

Variable Documentation

TR

basic::Tracer TR("apps.pilot.smlewis.AlanineScanner") ( "apps.pilot.smlewis.AlanineScanner"  )

static

Referenced by main(), and register_metrics().