sc.cc File Reference

#include <basic/options/option.hh>
#include <core/chemical/ChemicalManager.hh>
#include <core/pose/Pose.hh>
#include <core/pose/PDBInfo.hh>
#include <core/import_pose/pose_stream/MetaPoseInputStream.hh>
#include <core/import_pose/pose_stream/util.hh>
#include <core/scoring/sc/ShapeComplementarityCalculator.hh>
#include <devel/init.hh>
#include <utility/excn/Exceptions.hh>
#include <basic/options/keys/OptionKeys.hh>

Namespaces
	basic
	Tags used to tag messeges sent by MPI functions used to decide whether a slave is requesting a new job id or flagging as job as being a bad input.
	basic::options
	basic::options::OptionKeys
	basic::options::OptionKeys::sc

Functions
int	process_pose (core::pose::Pose &pose, core::scoring::sc::ShapeComplementarityCalculator &sc, std::string &molecule_1, std::string &molecule_2, int verbose)
int	main (int argc, char *argv[])

Variables
basic::options::StringOptionKey const	basic::options::OptionKeys::sc::molecule_1 ("sc:molecule_1")
basic::options::StringOptionKey const	basic::options::OptionKeys::sc::molecule_2 ("sc:molecule_2")
basic::options::BooleanOptionKey const	basic::options::OptionKeys::sc::verbose ("sc:verbose")
basic::options::BooleanOptionKey const	basic::options::OptionKeys::sc::quick ("sc:quick")
basic::options::RealOptionKey const	basic::options::OptionKeys::sc::density ("sc:density")
basic::options::RealOptionKey const	basic::options::OptionKeys::sc::rp ("sc:rp")
basic::options::RealOptionKey const	basic::options::OptionKeys::sc::sep ("sc:sec")
basic::options::RealOptionKey const	basic::options::OptionKeys::sc::trim ("sc:trim")
basic::options::RealOptionKey const	basic::options::OptionKeys::sc::weight ("sc:weight")

Function Documentation

main()

int main	(	int	argc,
		char *	argv[]
	)

References argv, count, utility::io::oc::cout, basic::options::OptionKeys::sc::density, test.T009_Exceptions::e, basic::init(), gaussian-sampling::input, basic::options::OptionKeys::sc::molecule_1, basic::options::OptionKeys::sc::molecule_2, option, beta_nonlocal::pose, process_pose(), basic::options::OptionKeys::sc::quick, basic::options::OptionKeys::in::file::residue_type_set, basic::options::OptionKeys::sc::rp, basic::options::OptionKeys::canonical_sampling::probabilities::sc, basic::options::OptionKeys::sc::sep, basic::options::OptionKeys::sc::trim, basic::options::OptionKeys::sc::verbose, and basic::options::OptionKeys::sc::weight.

process_pose()

int process_pose	(	core::pose::Pose &	pose,
		core::scoring::sc::ShapeComplementarityCalculator &	sc,
		std::string &	molecule_1,
		std::string &	molecule_2,
		int	verbose
	)

References predPRE::chain, utility::io::oc::cout, create_a3b_hbs::i, basic::options::OptionKeys::sc::molecule_1, basic::options::OptionKeys::sc::molecule_2, create_a3b_hbs::pdb_info, beta_nonlocal::pose, create_a3b_hbs::r, basic::options::OptionKeys::canonical_sampling::probabilities::sc, and basic::options::OptionKeys::sc::verbose.

Referenced by main().