HDmakerMover Class Reference

Inheritance diagram for HDmakerMover:

Public Member Functions
	HDmakerMover ()
void	apply (core::pose::Pose &pose) override
std::string	get_name () const override
virtual numeric::xyzVector< core::Real >	find_midpoint (numeric::xyzVector< core::Real > &xpoints, numeric::xyzVector< core::Real > &ypoints)
virtual Real	bb_score (pose::Pose &pose, core::Size aligned_chain_num, core::scoring::ScoreFunctionOP &scorefxn)
MoverOP	clone () const override
MoverOP	fresh_instance () const override

Private Attributes
core::scoring::ScoreFunctionOP	scorefxn_
int	sheet_start_
int	sheet_stop_
std::string	pdb_chain_
Real	maxE_

Constructor & Destructor Documentation

HDmakerMover()

HDmakerMover::HDmakerMover

(

)

References run::chain(), E_cutoff, option, sheet_start, and sheet_stop.

Member Function Documentation

apply()

void HDmakerMover::apply ( core::pose::Pose &  pose )

override

References utility::file::FileName::base(), predPRE::chain, utility::io::oc::cout, measure_params::cross(), test.T200_Scoring::hbond_set, create_a3b_hbs::ii, beta_nonlocal::jj, local::max_angle, numeric::midpoint(), kmeans_adaptive_kernel_density_bb_dependent_rotlib::n, basic::options::option, option, beta_nonlocal::pose, sheet_start, struct_file, TR, window_size, and xyz_center_vector().

Referenced by pyrosetta.distributed.tasks.rosetta_scripts.BaseRosettaScriptsTask::execute().

bb_score()

core::Real HDmakerMover::bb_score ( pose::Pose &  pose, core::Size  aligned_chain_num, core::scoring::ScoreFunctionOP &  scorefxn  )

virtual

References basic::options::OptionKeys::score::analytic_etable_evaluation, numeric::distance_squared(), create_a3b_hbs::ii, create_a3b_hbs::j, beta_nonlocal::jj, basic::options::option, beta_nonlocal::pose, res, oop_conformations::scorefxn, TR, utility_exit_with_message, and basic::options::OptionKeys::in::file::xyz.

clone()

MoverOP HDmakerMover::clone ( ) const

inlineoverride

find_midpoint()

numeric::xyzVector< core::Real > HDmakerMover::find_midpoint ( numeric::xyzVector< core::Real > &  xpoints, numeric::xyzVector< core::Real > &  ypoints  )

virtual

References numeric::midpoint().

fresh_instance()

MoverOP HDmakerMover::fresh_instance ( ) const

inlineoverride

References clone().

get_name()

std::string HDmakerMover::get_name ( ) const

inlineoverride

Member Data Documentation

maxE_

Real HDmakerMover::maxE_

private

pdb_chain_

std::string HDmakerMover::pdb_chain_

private

scorefxn_

core::scoring::ScoreFunctionOP HDmakerMover::scorefxn_

private

sheet_start_

int HDmakerMover::sheet_start_

private

sheet_stop_

int HDmakerMover::sheet_stop_

private

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The documentation for this class was generated from the following file:

• src/apps/public/scenarios/beta_strand_homodimer_design/homodimer_maker.cc