spec_prof_compare.cc File Reference

#include <devel/init.hh>
#include <protocols/mean_field/AAMatrix.hh>
#include <protocols/mean_field/jagged_array.hh>
#include <protocols/mean_field/jagged_array.functions.hh>
#include <protocols/mean_field/AAProb.hh>
#include <basic/Tracer.hh>
#include <utility/vector1.hh>
#include <utility/file/FileName.hh>
#include <utility/io/izstream.hh>
#include <iostream>
#include <basic/options/keys/mean_field.OptionKeys.gen.hh>
#include <basic/options/option.hh>

Functions
utility::vector1< std::string >	tokenize_line (std::istream &inputstream)
int	main (int argc, char *argv[])

Variables
static basic::Tracer	TR ("apps.pilot.arubenstein.spec_prof_compare")
	Pilot application source code for comparing specificity profiles using various metrics. More...

Function Documentation

main()

int main	(	int	argc,
		char *	argv[]
	)

References aa, argv, basic::options::OptionKeys::mean_field::bb_boltz_probs, basic::options::OptionKeys::mean_field::bb_list, begin, dist(), basic::options::OptionKeys::mean_field::dump_transfac, basic::options::OptionKeys::score::empty, evaluate_beta_mutants::file, lactamize::filename, create_a3b_hbs::i, basic::Tracer::Info, basic::init(), basic::options::OptionKeys::in::file::list, basic::options::option, predPRE::pdbname, make_symmdef_file_denovo::pos, spectral_cluster_kmeans_adaptive_kernel_density_bb_dependent_rotlib::prob, subloop_histogram::size, utility::slurp(), basic::options::OptionKeys::mean_field::spec_profile, tokenize_line(), TR, kmeans_adaptive_kernel_density_bb_dependent_rotlib::v, and vec().

tokenize_line()

utility::vector1< std::string > tokenize_line

(

std::istream &

inputstream

)

References getline().

Referenced by main().

Variable Documentation

TR

basic::Tracer TR("apps.pilot.arubenstein.spec_prof_compare") ( "apps.pilot.arubenstein.spec_prof_compare"  )

static

Pilot application source code for comparing specificity profiles using various metrics.

Author

arubenstein

Referenced by main().