BuildPeptide.cc File Reference

#include <basic/options/option.hh>
#include <basic/options/keys/in.OptionKeys.gen.hh>
#include <basic/options/keys/out.OptionKeys.gen.hh>
#include <basic/options/keys/OptionKeys.hh>
#include <basic/Tracer.hh>
#include <core/types.hh>
#include <core/chemical/AA.hh>
#include <core/chemical/ChemicalManager.hh>
#include <core/pose/annotated_sequence.hh>
#include <core/pose/Pose.hh>
#include <devel/init.hh>
#include <core/sequence/Sequence.hh>
#include <core/sequence/util.hh>
#include <basic/options/option_macros.hh>
#include <utility/vector1.hh>
#include <utility/excn/Exceptions.hh>

Functions
int	main (int argc, char *argv[])

Variables
static basic::Tracer	TR ("BuildPeptide")
	Application that reads in a peptides sequence file and outputs a linear peptide. More...

Function Documentation

main()

int main	(	int	argc,
		char *	argv[]
	)

References argv, basic::options::OptionKeys::chemical::chemical, test.T009_Exceptions::e, in::file::fasta(), create_a3b_hbs::i, basic::init(), NEW_OPT, out::file::o(), basic::options::option, oop_conformations::phi, beta_nonlocal::pose, oop_conformations::psi, basic::options::OptionKeys::in::file::residue_type_set, basic::options::OptionKeys::frags::scoring::scoring, and basic::options::OptionKeys::inout::dbms::user.

Variable Documentation

TR

basic::Tracer TR("BuildPeptide") ( "BuildPeptide"  )

static

Application that reads in a peptides sequence file and outputs a linear peptide.

Author

Barak Raveh, Nir London

Date

June 01, 2009