kdtree_disulf.cc File Reference

#include <core/types.hh>
#include <devel/init.hh>
#include <core/pose/Pose.hh>
#include <core/kinematics/RT.hh>
#include <core/io/pdb/pdb_writer.hh>
#include <basic/options/option.hh>
#include <basic/options/keys/robert.OptionKeys.gen.hh>
#include <basic/options/keys/james.OptionKeys.gen.hh>
#include <basic/database/open.hh>
#include <core/conformation/Conformation.fwd.hh>
#include <core/conformation/Residue.hh>
#include <core/conformation/Atom.hh>
#include <utility/vector1.hh>
#include <utility/io/izstream.hh>
#include <utility/io/ozstream.hh>
#include <ObjexxFCL/string.functions.hh>
#include <ObjexxFCL/FArray2A.hh>
#include <ObjexxFCL/FArray2A.fwd.hh>
#include <numeric/random/random.hh>
#include <numeric/xyzMatrix.hh>
#include <numeric/xyzMatrix.fwd.hh>
#include <iostream>
#include <string>
#include <protocols/jumping/StrandPairing.hh>
#include <numeric/xyz.functions.hh>
#include <ObjexxFCL/format.hh>
#include <numeric/kdtree/util.hh>
#include <numeric/kdtree/calc_distance.hh>
#include <numeric/kdtree/nearest_neighbors.hh>
#include <numeric/kdtree/KDTree.hh>
#include <numeric/kdtree/KDPoint.hh>
#include <numeric/kdtree/KDPointList.hh>
#include <numeric/kdtree/WrappedPrimitive.hh>
#include <utility/excn/Exceptions.hh>

Typedefs
typedef numeric::kdtree::WrappedPrimitive< core::kinematics::RT >	WrappedRT
typedef utility::pointer::owning_ptr< WrappedRT >	WrappedRTOP

Functions
int	main (int argc, char *argv[])

Detailed Description

Author

James Thompson

Typedef Documentation

WrappedRT

typedef numeric::kdtree::WrappedPrimitive< core::kinematics::RT > WrappedRT

WrappedRTOP

typedef utility::pointer::owning_ptr< WrappedRT > WrappedRTOP

Function Documentation

main()

int main	(	int	argc,
		char *	argv[]
	)

References argv, utility::io::ozstream::close(), utility::io::oc::cout, test.T009_Exceptions::e, end, utility::io::izstream::eof(), getline(), basic::init(), line, numeric::kdtree::nearest_neighbors(), basic::options::OptionKeys::frags::contacts::neighbors, basic::database::open(), option, james::real(), beta_nonlocal::rts, numeric::kdtree::sq_vec_distance(), basic::options::OptionKeys::rigid::translation, and numeric::kdtree::WrappedPrimitive< T >::val().