thermal_sampler_alpha.cc File Reference

#include <core/types.hh>
#include <core/chemical/ChemicalManager.hh>
#include <basic/options/option.hh>
#include <basic/options/option_macros.hh>
#include <protocols/viewer/viewers.hh>
#include <core/pose/Pose.hh>
#include <core/pose/full_model_info/FullModelInfo.hh>
#include <devel/init.hh>
#include <core/import_pose/import_pose.hh>
#include <core/import_pose/FullModelPoseBuilder.hh>
#include <core/import_pose/pose_stream/PoseInputStream.hh>
#include <core/import_pose/pose_stream/PDBPoseInputStream.hh>
#include <core/import_pose/pose_stream/SilentFilePoseInputStream.hh>
#include <utility/vector1.hh>
#include <protocols/recces/scratch/ThermalSamplingMover.hh>
#include <iostream>
#include <string>
#include <basic/options/keys/in.OptionKeys.gen.hh>
#include <basic/options/keys/chemical.OptionKeys.gen.hh>
#include <basic/options/keys/full_model.OptionKeys.gen.hh>
#include <basic/options/keys/score.OptionKeys.gen.hh>
#include <basic/options/keys/recces.OptionKeys.gen.hh>
#include <utility/excn/Exceptions.hh>
#include <protocols/stepwise/modeler/working_parameters/StepWiseWorkingParameters.fwd.hh>
#include <protocols/stepwise/sampler/rna/RNA_KinematicCloser.fwd.hh>

Functions
void	thermal_sampler ()
void *	my_main (void *)
int	main (int argc, char *argv[])

Function Documentation

main()

int main	(	int	argc,
		char *	argv[]
	)

References basic::options::OptionKeys::recces::thermal_sampling::angle_range_bb, basic::options::OptionKeys::recces::thermal_sampling::angle_range_chi, argv, basic::options::OptionKeys::recces::thermal_sampling::bb_stdev, basic::options::OptionKeys::recces::thermal_sampling::chi_stdev, utility::io::oc::cout, full_model::cutpoint_open(), basic::options::OptionKeys::recces::dump_freq, basic::options::OptionKeys::matdes::dock::dump_pdb, basic::options::OptionKeys::recces::dump_silent, test.T009_Exceptions::e, in::file::fasta(), basic::options::OptionKeys::recces::thermal_sampling::free_residues, basic::init(), in::file::input_res(), my_main(), basic::options::OptionKeys::recces::n_cycle, NEW_OPT, option, basic::options::OptionKeys::recces::out_prefix, basic::options::OptionKeys::recces::out_torsions, basic::options::OptionKeys::chemical::patch_selectors, in::file::s(), basic::options::OptionKeys::recces::thermal_sampling::sample_residues, in::file::silent(), basic::options::OptionKeys::recces::st_weights, basic::options::OptionKeys::recces::thermal_sampling::standard_bb_stdev, in::file::tags(), basic::options::OptionKeys::recces::temps, viewer_main(), and score::weights().

my_main()

void* my_main

(

void *

)

References utility::options::OptionKeys::options::exit, and thermal_sampler().

Referenced by main().

thermal_sampler()

void thermal_sampler

(

)

References basic::options::OptionKeys::chemical::chemical, in::file::fasta(), gaussian-sampling::input, option, beta_nonlocal::pose, basic::options::OptionKeys::recces::base_pair::recces, basic::options::OptionKeys::full_model::rna::rna, in::file::s(), basic::options::OptionKeys::frags::scoring::scoring, basic::options::OptionKeys::out::path::scratch, basic::options::OptionKeys::in::file::silent, in::file::silent(), in::file::tags(), and basic::options::OptionKeys::inout::dbms::user.

Referenced by my_main().